Datasets:

zirui3

/

TSSB-3M-ext

like 0

autoreduce

209986685325d2ffde609cf885cf84e483ab84e6

a041735626f39d92acb23365d3335b6794fb72bb

queue_processors/autoreduction_processor/post_process_admin.py

https://github.com/ISISScientificComputing/autoreduce

@@ -498,7 +498,7 @@ class PostProcessAdmin: if self.message.overwrite: return append_path(path, ["run-version-0"]) - run_versions = [int(i.split("-")[-1]) for i in glob.glob("run-version-[0-9]*")] + run_versions = [int(i.split("-")[-1]) for i in glob.glob(f"{path}run-version-[0-9]*")] try: return append_path(path, [f"run-version-{max(run_versions) + 1}"]) except ValueError:

run_versions = [ int ( i . split ( "-" ) [ - 1 ] ) for i in glob . glob ( "run-version-[0-9]*" ) ]

run_versions = [ int ( i . split ( "-" ) [ - 1 ] ) for i in glob . glob ( f"{path}run-version-[0-9]*" ) ]

CHANGE_STRING_LITERAL

[["Update", ["string:\"run-version-[0-9]*\"", 2, 66, 2, 86], "f\"{path}run-version-[0-9]*\""]]

ISISScientificComputing/autoreduce@209986685325d2ffde609cf885cf84e483ab84e6

autoreduce

84eb20f7cc57ab256e358062c53bbd7b81ce2dfa

dbda5e4775ae1e181d81722ab0eda5d140978372

queue_processors/autoreduction_processor/reduction_service.py

https://github.com/ISISScientificComputing/autoreduce

@@ -189,7 +189,7 @@ def reduce(reduction_dir, temp_dir, datafile, script, run_number, log_stream): except Exception as ex: LOGGER.error("exception caught in reduction script") LOGGER.error(traceback.format_exc()) - with open(temp_dir.script_log(), "a") as target: + with open(temp_dir.script_log, "a") as target: target.writelines(str(ex) + "\n") target.write(traceback.format_exc()) raise ReductionScriptError("Exception in reduction script", ex) from ex

with open ( temp_dir . script_log ( ) , "a" ) as target : target . writelines ( str ( ex ) + "\n" ) target . write ( traceback . format_exc ( ) )

with open ( temp_dir . script_log , "a" ) as target : target . writelines ( str ( ex ) + "\n" ) target . write ( traceback . format_exc ( ) )

SINGLE_STMT

[["Move", ["argument_list", 3, 22, 3, 50], ["attribute", 3, 23, 3, 42], 1], ["Delete", ["(:(", 3, 42, 3, 43]], ["Delete", ["):)", 3, 43, 3, 44]], ["Delete", ["argument_list", 3, 42, 3, 44]], ["Delete", ["call", 3, 23, 3, 44]]]

ISISScientificComputing/autoreduce@84eb20f7cc57ab256e358062c53bbd7b81ce2dfa

autoreduce

efda067038d78400a82754d20e1e277fc67d2b81

90d7db60c602fc303e07e5fa949823551080daac

autoreduce_webapp/reduction_variables/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -270,7 +270,7 @@ def run_confirmation(request, run_number, run_version=0): script = ScriptFile(script=script_binary, file_name='reduce.py') script.save() - default_variables = InstrumentVariablesUtils().get_variables_for_run(instrument.name, run_number) + default_variables = reduction_run.run_variables new_variables = [] for default_var in default_variables: form_name = 'var-'

default_variables = InstrumentVariablesUtils ( ) . get_variables_for_run ( instrument . name , run_number )

default_variables = reduction_run . run_variables

SINGLE_STMT

[["Move", ["assignment", 3, 9, 3, 106], ["attribute", 3, 29, 3, 77], 2], ["Update", ["identifier:InstrumentVariablesUtils", 3, 29, 3, 53], "reduction_run"], ["Move", ["attribute", 3, 29, 3, 77], ["identifier:InstrumentVariablesUtils", 3, 29, 3, 53], 0], ["Update", ["identifier:get_variables_for_run", 3, 56, 3, 77], "run_variables"], ["Delete", ["(:(", 3, 53, 3, 54]], ["Delete", ["):)", 3, 54, 3, 55]], ["Delete", ["argument_list", 3, 53, 3, 55]], ["Delete", ["call", 3, 29, 3, 55]], ["Delete", ["(:(", 3, 77, 3, 78]], ["Delete", ["identifier:instrument", 3, 78, 3, 88]], ["Delete", [".:.", 3, 88, 3, 89]], ["Delete", ["identifier:name", 3, 89, 3, 93]], ["Delete", ["attribute", 3, 78, 3, 93]], ["Delete", [",:,", 3, 93, 3, 94]], ["Delete", ["identifier:run_number", 3, 95, 3, 105]], ["Delete", ["):)", 3, 105, 3, 106]], ["Delete", ["argument_list", 3, 77, 3, 106]], ["Delete", ["call", 3, 29, 3, 106]]]

ISISScientificComputing/autoreduce@efda067038d78400a82754d20e1e277fc67d2b81

autoreduce

c2870840eac6a1537478647916b5bf934e7b0deb

a80d399038979b768e289aabf20bacb21a842bbf

autoreduce_webapp/reduction_viewer/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -82,7 +82,7 @@ def run_list(request): experiments = icat.get_valid_experiments_for_instruments(int(request.user.username), instrument_names) owned_instruments = icat.get_owned_instruments(int(request.user.username)) for instrument_name in instrument_names: - instrument = Instrument.objects.filter(name=instrument) + instrument = Instrument.objects.filter(name=instrument_name) if not instrument: continue instrument_queued_runs = 0

instrument = Instrument . objects . filter ( name = instrument )

instrument = Instrument . objects . filter ( name = instrument_name )

CHANGE_IDENTIFIER_USED

[["Update", ["identifier:instrument", 3, 53, 3, 63], "instrument_name"]]

ISISScientificComputing/autoreduce@c2870840eac6a1537478647916b5bf934e7b0deb

autoreduce

004d112c5dec2e4ff34b06b774cfd38f8c03a5f5

c7d05fd28e3aa3afb1ea3c99126b2bbfb24d445d

autoreduce_webapp/reduction_variables/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -117,7 +117,7 @@ class InstrumentVariablesUtils(object): variables = InstrumentVariable.objects.filter(instrument=reduction_run.instrument, experiment_reference=reduction_run.experiment.reference_number) # No experiment-specific variables, lets look for run number if not variables: - variables_run_start = InstrumentVariable.objects.filter(instrument=reduction_run.instrument,start_run__lte=reduction_run.run_number, reference_number=None ).order_by('-start_run').first().start_run + variables_run_start = InstrumentVariable.objects.filter(instrument=reduction_run.instrument,start_run__lte=reduction_run.run_number, experiment_reference__isnull=True ).order_by('-start_run').first().start_run variables = InstrumentVariable.objects.filter(instrument=reduction_run.instrument,start_run=variables_run_start) # Still not found any variables, we better create some if not variables:

variables_run_start = InstrumentVariable . objects . filter ( instrument = reduction_run . instrument , start_run__lte = reduction_run . run_number , reference_number = None ) . order_by ( '-start_run' ) . first ( ) . start_run

variables_run_start = InstrumentVariable . objects . filter ( instrument = reduction_run . instrument , start_run__lte = reduction_run . run_number , experiment_reference__isnull = True ) . order_by ( '-start_run' ) . first ( ) . start_run

SINGLE_STMT

[["Update", ["identifier:reference_number", 3, 146, 3, 162], "experiment_reference__isnull"], ["Insert", ["keyword_argument", 3, 146, 3, 167], ["true:True", "T"], 2], ["Delete", ["none:None", 3, 163, 3, 167]]]

ISISScientificComputing/autoreduce@004d112c5dec2e4ff34b06b774cfd38f8c03a5f5

autoreduce

f697d6916360d991afd8ed610dc722b6976e465d

004d112c5dec2e4ff34b06b774cfd38f8c03a5f5

autoreduce_webapp/reduction_variables/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -213,7 +213,7 @@ class ReductionVariablesUtils(object): if not reduction_run: reduction_run = variables.reduction_run.id else: - if reduction_run is not variables.reduction_run.id: + if reduction_run != variables.reduction_run.id: raise Exception("All run variables must be for the same reduction run") # Currently only supports a single script file

if reduction_run is not variables . reduction_run . id : raise Exception ( "All run variables must be for the same reduction run" )

if reduction_run != variables . reduction_run . id : raise Exception ( "All run variables must be for the same reduction run" )

SINGLE_STMT

[["Insert", ["comparison_operator", 3, 20, 3, 67], ["!=:!=", "T"], 1], ["Delete", ["is:is", 3, 34, 3, 36]], ["Delete", ["not:not", 3, 37, 3, 40]]]

ISISScientificComputing/autoreduce@f697d6916360d991afd8ed610dc722b6976e465d

autoreduce

782edb4a959413ba34737f8cba176ab73fbaa120

5fad8f8b26da809315760f8560d3114f208d5496

autoreduce_webapp/reduction_variables/tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -119,7 +119,7 @@ class InstrumentVariablesUtilsTestCase(TestCase): def test_get_current_script_text_successful(self): script_file = os.path.join(REDUCTION_SCRIPT_BASE, 'valid', 'reduce.py') - f = open(reduction_file, 'rb') + f = open(script_file, 'rb') script_binary = f.read() script = InstrumentVariablesUtils().get_current_script_text('valid')

f = open ( reduction_file , 'rb' )

f = open ( script_file , 'rb' )

CHANGE_IDENTIFIER_USED

[["Update", ["identifier:reduction_file", 3, 18, 3, 32], "script_file"]]

ISISScientificComputing/autoreduce@782edb4a959413ba34737f8cba176ab73fbaa120

autoreduce

fb146ee60996ebda040ec2470ad58fc1579a42a0

1a220e90ffd39df5dead8b2b7e0904f6e383b803

autoreduce_webapp/reduction_variables/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -193,7 +193,7 @@ class InstrumentVariablesUtils(object): - instrument = InstrumentUtils().get_instrument(name=instrument_name) + instrument = InstrumentUtils().get_instrument(instrument_name) completed_status = StatusUtils().get_completed() # Get latest run number and latest experiment reference

instrument = InstrumentUtils ( ) . get_instrument ( name = instrument_name )

instrument = InstrumentUtils ( ) . get_instrument ( instrument_name )

SINGLE_STMT

[["Move", ["argument_list", 0, 54, 0, 76], ["identifier:instrument_name", 0, 60, 0, 75], 1], ["Delete", ["identifier:name", 0, 55, 0, 59]], ["Delete", ["=:=", 0, 59, 0, 60]], ["Delete", ["keyword_argument", 0, 55, 0, 75]]]

ISISScientificComputing/autoreduce@fb146ee60996ebda040ec2470ad58fc1579a42a0

autoreduce

d154a2949651210137f0488e921fd6e0666c34a5

7ad89abf71a36f4a477068ffdc89164b17d9b359

autoreduce_webapp/reduction_variables/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -143,7 +143,7 @@ class InstrumentVariablesUtils(object): variables = InstrumentVariable.objects.filter(instrument=reduction_run.instrument,start_run=variables_run_start) except AttributeError: # Still not found any variables, we better create some - variables = self.set_default_instrument_variables(reduction_run.instrument) + variables = self.set_default_instrument_variables(reduction_run.instrument.name) return variables def get_current_script_text(self, instrument_name):

AttributeError : variables = self . set_default_instrument_variables ( reduction_run . instrument )

AttributeError : variables = self . set_default_instrument_variables ( reduction_run . instrument . name )

ADD_ATTRIBUTE_ACCESS

[["Move", ["attribute", 3, 67, 3, 91], ["attribute", 3, 67, 3, 91], 0], ["Insert", ["attribute", 3, 67, 3, 91], [".:.", "T"], 1], ["Insert", ["attribute", 3, 67, 3, 91], ["identifier:name", "T"], 2]]

ISISScientificComputing/autoreduce@d154a2949651210137f0488e921fd6e0666c34a5

autoreduce

53cd2b760664fc43b2756394abbac7d1efb17bc6

d154a2949651210137f0488e921fd6e0666c34a5

autoreduce_webapp/reduction_variables/tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -148,7 +148,7 @@ class InstrumentVariablesUtilsTestCase(TestCase): self.assertEqual(len(variables), len(saved_variables), "Expecting all returned variables to have been saved") def test_set_default_instrument_variables_no_start_run(self): - variables = InstrumentVariablesUtils().set_default_instrument_variables("valid") + variables = InstrumentVariablesUtils().set_default_instrument_variables("valid", None) self.assertNotEqual(variables, None, 'Expecting some variables returned') self.assertNotEqual(variables, [], 'Expecting some variables returned')

variables = InstrumentVariablesUtils ( ) . set_default_instrument_variables ( "valid" )

variables = InstrumentVariablesUtils ( ) . set_default_instrument_variables ( "valid" , None )

SAME_FUNCTION_MORE_ARGS

[["Insert", ["argument_list", 3, 80, 3, 89], [",:,", "T"], 2], ["Insert", ["argument_list", 3, 80, 3, 89], ["none:None", "T"], 3]]

ISISScientificComputing/autoreduce@53cd2b760664fc43b2756394abbac7d1efb17bc6

autoreduce

8b57a4546a4b1b4f53600e46c84bbd8afc06f753

57c87b6a8f9bda1b10a765fd53734fed65b9db9d

autoreduce_webapp/reduction_variables/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -52,7 +52,7 @@ class VariableUtils(object): if '.' in str(value): return float(value) else: - return re.sub("[^0-9]+", "", value) + return int(re.sub("[^0-9]+", "", str(value))) if var_type == "list_text": var_list = str(value).split(',') list_text = []

return re . sub ( "[^0-9]+" , "" , value )

return int ( re . sub ( "[^0-9]+" , "" , str ( value ) ) )

SINGLE_STMT

[["Insert", ["call", 3, 24, 3, 52], ["identifier:int", "T"], 0], ["Insert", ["call", 3, 24, 3, 52], ["argument_list", "N0"], 1], ["Insert", "N0", ["(:(", "T"], 0], ["Insert", "N0", ["call", "N1"], 1], ["Insert", "N0", ["):)", "T"], 2], ["Move", "N1", ["attribute", 3, 24, 3, 30], 0], ["Move", "N1", ["argument_list", 3, 30, 3, 52], 1], ["Insert", ["argument_list", 3, 30, 3, 52], ["call", "N2"], 5], ["Insert", ["argument_list", 3, 30, 3, 52], ["):)", "T"], 6], ["Insert", "N2", ["identifier:str", "T"], 0], ["Insert", "N2", ["argument_list", "N3"], 1], ["Insert", "N3", ["(:(", "T"], 0], ["Move", "N3", ["identifier:value", 3, 46, 3, 51], 1], ["Move", "N3", ["):)", 3, 51, 3, 52], 2]]

ISISScientificComputing/autoreduce@8b57a4546a4b1b4f53600e46c84bbd8afc06f753

autoreduce

04e43e9af6b7e94433037b4864f0cfdb59d33050

a42d44cdc2eabd16006570b80721719b6a1ecaa1

autoreduce_webapp/reduction_variables/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -49,7 +49,7 @@ class VariableUtils(object): if var_type == "text": return str(value) if var_type == "number": - if not value: + if not value or not re.match('[0-9]+', str(value)): return None if '.' in str(value): return float(value)

if not value : return None

if not value or not re . match ( '[0-9]+' , str ( value ) ) : return None

LESS_SPECIFIC_IF

[["Insert", ["not_operator", 3, 16, 3, 25], ["boolean_operator", "N0"], 1], ["Move", "N0", ["identifier:value", 3, 20, 3, 25], 0], ["Insert", "N0", ["or:or", "T"], 1], ["Insert", "N0", ["not_operator", "N1"], 2], ["Insert", "N1", ["not:not", "T"], 0], ["Insert", "N1", ["call", "N2"], 1], ["Insert", "N2", ["attribute", "N3"], 0], ["Insert", "N2", ["argument_list", "N4"], 1], ["Insert", "N3", ["identifier:re", "T"], 0], ["Insert", "N3", [".:.", "T"], 1], ["Insert", "N3", ["identifier:match", "T"], 2], ["Insert", "N4", ["(:(", "T"], 0], ["Insert", "N4", ["string:'[0-9]+'", "T"], 1], ["Insert", "N4", [",:,", "T"], 2], ["Insert", "N4", ["call", "N5"], 3], ["Insert", "N4", ["):)", "T"], 4], ["Insert", "N5", ["identifier:str", "T"], 0], ["Insert", "N5", ["argument_list", "N6"], 1], ["Insert", "N6", ["(:(", "T"], 0], ["Insert", "N6", ["identifier:value", "T"], 1], ["Insert", "N6", ["):)", "T"], 2]]

ISISScientificComputing/autoreduce@04e43e9af6b7e94433037b4864f0cfdb59d33050

autoreduce

44d5f4bba87ab8076af6a953597c387caa7c1c1f

dc68d30085b368d37f220c1c9b4dfc2fee0418f8

autoreduce_webapp/reduction_variables/tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -596,7 +596,7 @@ class ReductionVariablesUtilsTestCase(TestCase): self.assertTrue('advanced_vars' in arguments, "Expecting arguments to have a 'advanced_vars' key.") self.assertEqual(arguments['standard_vars']['test'], 'testvalue1', "Expecting to find testvalue1 in standard_vars.") self.assertTrue("reduction_script_temp" in script_path, "Expecting script_path to point to 'reduction_script_temp'.") - self.assertTrue(re.match('\w{8}-\w{4}-\w{4}-\w{13}\.py$', script_path), "Expecting script_path to contain a uuid filename.") + self.assertTrue(re.match('\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$', script_path), "Expecting script_path to contain a uuid filename but was %s." % script_path) def test_get_script_path_and_arguments_empty(self): with self.assertRaises(Exception) as e:

self . assertTrue ( re . match ( '\w{8}-\w{4}-\w{4}-\w{13}\.py$' , script_path ) , "Expecting script_path to contain a uuid filename." )

self . assertTrue ( re . match ( '\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$' , script_path ) , "Expecting script_path to contain a uuid filename but was %s." % script_path )

SINGLE_STMT

[["Insert", ["argument_list", 3, 24, 3, 133], ["binary_operator", "N0"], 3], ["Update", ["string:\"Expecting script_path to contain a uuid filename.\"", 3, 81, 3, 132], "\"Expecting script_path to contain a uuid filename but was %s.\""], ["Move", "N0", ["string:\"Expecting script_path to contain a uuid filename.\"", 3, 81, 3, 132], 0], ["Insert", "N0", ["%:%", "T"], 1], ["Insert", "N0", ["identifier:script_path", "T"], 2], ["Update", ["string:'\\w{8}-\\w{4}-\\w{4}-\\w{13}\\.py$'", 3, 34, 3, 65], "'\\w{8}-\\w{4}-\\w{4}-\\w{4}-\\w{12}\\.py$'"]]

ISISScientificComputing/autoreduce@44d5f4bba87ab8076af6a953597c387caa7c1c1f

autoreduce

112b6320b77916d06887cc00c7ba7ce2022ab4f9

44d5f4bba87ab8076af6a953597c387caa7c1c1f

autoreduce_webapp/reduction_variables/tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -596,7 +596,7 @@ class ReductionVariablesUtilsTestCase(TestCase): self.assertTrue('advanced_vars' in arguments, "Expecting arguments to have a 'advanced_vars' key.") self.assertEqual(arguments['standard_vars']['test'], 'testvalue1', "Expecting to find testvalue1 in standard_vars.") self.assertTrue("reduction_script_temp" in script_path, "Expecting script_path to point to 'reduction_script_temp'.") - self.assertTrue(re.match('\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$', script_path), "Expecting script_path to contain a uuid filename but was %s." % script_path) + self.assertTrue(re.search('(\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$', script_path), "Expecting script_path to contain a uuid filename but was %s." % script_path) def test_get_script_path_and_arguments_empty(self): with self.assertRaises(Exception) as e:

self . assertTrue ( re . match ( '\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$' , script_path ) , "Expecting script_path to contain a uuid filename but was %s." % script_path )

self . assertTrue ( re . search ( '(\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$' , script_path ) , "Expecting script_path to contain a uuid filename but was %s." % script_path )

SINGLE_STMT

[["Update", ["identifier:match", 3, 28, 3, 33], "search"], ["Update", ["string:'\\w{8}-\\w{4}-\\w{4}-\\w{4}-\\w{12}\\.py$'", 3, 34, 3, 71], "'(\\w{8}-\\w{4}-\\w{4}-\\w{4}-\\w{12}\\.py$'"]]

ISISScientificComputing/autoreduce@112b6320b77916d06887cc00c7ba7ce2022ab4f9

autoreduce

c113fa2067c927d31c4928249b6b0b5baa409bfb

112b6320b77916d06887cc00c7ba7ce2022ab4f9

autoreduce_webapp/reduction_variables/tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -596,7 +596,7 @@ class ReductionVariablesUtilsTestCase(TestCase): self.assertTrue('advanced_vars' in arguments, "Expecting arguments to have a 'advanced_vars' key.") self.assertEqual(arguments['standard_vars']['test'], 'testvalue1', "Expecting to find testvalue1 in standard_vars.") self.assertTrue("reduction_script_temp" in script_path, "Expecting script_path to point to 'reduction_script_temp'.") - self.assertTrue(re.search('(\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$', script_path), "Expecting script_path to contain a uuid filename but was %s." % script_path) + self.assertTrue(re.search('(\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$)', script_path), "Expecting script_path to contain a uuid filename but was %s." % script_path) def test_get_script_path_and_arguments_empty(self): with self.assertRaises(Exception) as e:

self . assertTrue ( re . search ( '(\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$' , script_path ) , "Expecting script_path to contain a uuid filename but was %s." % script_path )

self . assertTrue ( re . search ( '(\w{8}-\w{4}-\w{4}-\w{4}-\w{12}\.py$)' , script_path ) , "Expecting script_path to contain a uuid filename but was %s." % script_path )

CHANGE_STRING_LITERAL

[["Update", ["string:'(\\w{8}-\\w{4}-\\w{4}-\\w{4}-\\w{12}\\.py$'", 3, 35, 3, 73], "'(\\w{8}-\\w{4}-\\w{4}-\\w{4}-\\w{12}\\.py$)'"]]

ISISScientificComputing/autoreduce@c113fa2067c927d31c4928249b6b0b5baa409bfb

autoreduce

42b6f68c9ae882ce53c0a55c59658400cb2bfb15

19896659326c8e235b74a6eba0438fe2197d2257

autoreduce_webapp/autoreduce_webapp/tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -311,7 +311,7 @@ class QueueProcessorTestCase(TestCase): parent.assertNotEqual(data_dict['reduction_script'], '', "Expecting a reduction script.") parent.assertEqual(data_dict['reduction_arguments'], {}, "Expecting arguments to be an empty dictionary.") - listener = Listener(mock_client) + listener = Listener(mock_client()) listener.on_message(headers, json.dumps(message)) self.assertTrue(send_called[0], "Expecting send to be called")

listener = Listener ( mock_client )

listener = Listener ( mock_client ( ) )

SINGLE_STMT

[["Insert", ["argument_list", 3, 28, 3, 41], ["call", "N0"], 1], ["Insert", ["argument_list", 3, 28, 3, 41], ["):)", "T"], 2], ["Move", "N0", ["identifier:mock_client", 3, 29, 3, 40], 0], ["Insert", "N0", ["argument_list", "N1"], 1], ["Insert", "N1", ["(:(", "T"], 0], ["Move", "N1", ["):)", 3, 40, 3, 41], 1]]

ISISScientificComputing/autoreduce@42b6f68c9ae882ce53c0a55c59658400cb2bfb15

autoreduce

8420daa96ec291e5d8173668e43b67fcb92ba203

ba614e177939b166c79b4536d1589e3c174b7feb

autoreduce_webapp/autoreduce_webapp/tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -273,7 +273,7 @@ class QueueProcessorTestCase(TestCase): def test_data_ready_no_vaiables_in_script(self): rb_number = self.get_rb_number() - instrument_name = "test_data_ready_multiple_runs-TestInstrument" + instrument_name = "test_data_ready_no_vaiables_in_script-TestInstrument" directory = os.path.join(REDUCTION_SCRIPT_BASE, instrument_name) test_reduce = os.path.join(os.path.dirname(__file__), '../', 'test_files','empty_reduce.py')

instrument_name = "test_data_ready_multiple_runs-TestInstrument"

instrument_name = "test_data_ready_no_vaiables_in_script-TestInstrument"

CHANGE_STRING_LITERAL

[["Update", ["string:\"test_data_ready_multiple_runs-TestInstrument\"", 3, 27, 3, 73], "\"test_data_ready_no_vaiables_in_script-TestInstrument\""]]

ISISScientificComputing/autoreduce@8420daa96ec291e5d8173668e43b67fcb92ba203

autoreduce

93eac6fed691988988326dccb60ff73a729c1182

e56c8ab7025e9106167594100b5d29eda74f41a4

autoreduce_webapp/reduction_variables/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -377,7 +377,7 @@ class ScriptUtils(object): def get_reduce_scripts(self, scripts): script_binary = None script_vars_binary = None - for script in run_variables[0].scripts.all(): + for script in scripts: if script.file_name == "reduce.py": script_binary = script.script elif script.file_name == "reduce_vars.py":

for script in run_variables [ 0 ] . scripts . all ( ) : if script . file_name == "reduce.py" : script_binary = script . script elif script . file_name == "reduce_vars.py" :

for script in scripts : if script . file_name == "reduce.py" : script_binary = script . script elif script . file_name == "reduce_vars.py" :

SINGLE_STMT

[["Move", ["for_statement", 3, 9, 6, 55], ["identifier:scripts", 3, 40, 3, 47], 3], ["Delete", ["identifier:run_variables", 3, 23, 3, 36]], ["Delete", ["[:[", 3, 36, 3, 37]], ["Delete", ["integer:0", 3, 37, 3, 38]], ["Delete", ["]:]", 3, 38, 3, 39]], ["Delete", ["subscript", 3, 23, 3, 39]], ["Delete", [".:.", 3, 39, 3, 40]], ["Delete", ["attribute", 3, 23, 3, 47]], ["Delete", [".:.", 3, 47, 3, 48]], ["Delete", ["identifier:all", 3, 48, 3, 51]], ["Delete", ["attribute", 3, 23, 3, 51]], ["Delete", ["(:(", 3, 51, 3, 52]], ["Delete", ["):)", 3, 52, 3, 53]], ["Delete", ["argument_list", 3, 51, 3, 53]], ["Delete", ["call", 3, 23, 3, 53]]]

ISISScientificComputing/autoreduce@93eac6fed691988988326dccb60ff73a729c1182

autoreduce

4667aacd4ff4c3d762b8b2f1a8204207e4560fa8

351f316a48c1d5fee510d490a499efb356b89e79

autoreduce_webapp/autoreduce_webapp/queue_processor.py

https://github.com/ISISScientificComputing/autoreduce

@@ -80,7 +80,7 @@ class Listener(object): logging.warning("No instrument variables found on %s for run %s" % (instrument.name, self._data_dict['run_number'])) else: for variables in variables: - reduction_run_variables = RunVariable(name=variables.name, value=variables.value, type=variables.type) + reduction_run_variables = RunVariable(name=variables.name, value=variables.value, type=variables.type, is_advanced=variable.is_advanced) reduction_run_variables.reduction_run = reduction_run reduction_run.run_variables.add(reduction_run_variables) reduction_run_variables.save()

else : for variables in variables : reduction_run_variables = RunVariable ( name = variables . name , value = variables . value , type = variables . type )

else : for variables in variables : reduction_run_variables = RunVariable ( name = variables . name , value = variables . value , type = variables . type , is_advanced = variable . is_advanced )

SAME_FUNCTION_MORE_ARGS

[["Insert", ["argument_list", 3, 58, 3, 123], [",:,", "T"], 6], ["Insert", ["argument_list", 3, 58, 3, 123], ["keyword_argument", "N0"], 7], ["Insert", "N0", ["identifier:is_advanced", "T"], 0], ["Insert", "N0", ["=:=", "T"], 1], ["Insert", "N0", ["attribute", "N1"], 2], ["Insert", "N1", ["identifier:variable", "T"], 0], ["Insert", "N1", [".:.", "T"], 1], ["Insert", "N1", ["identifier:is_advanced", "T"], 2]]

ISISScientificComputing/autoreduce@4667aacd4ff4c3d762b8b2f1a8204207e4560fa8

autoreduce

9457bbf6c25180de11dec9b9fe5991628c48a88a

eb0021cdb4985dee46821046e4ec9c1e92c6985c

autoreduce_webapp/reduction_viewer/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -73,7 +73,7 @@ def run_list(request): instruments = [] with ICATCommunication(AUTH='uows',SESSION={'sessionid':request.session.get('sessionid')}) as icat: if request.user.is_superuser: - instrument_names = instrument.objects.values_list('name', flat=true) + instrument_names = Instrument.objects.values_list('name', flat=true) else: instrument_names = icat.get_valid_instruments(int(request.user.username)) owned_instruments = request.session.get('owned_instruments', default=[])

instrument_names = instrument . objects . values_list ( 'name' , flat = true )

instrument_names = Instrument . objects . values_list ( 'name' , flat = true )

CHANGE_IDENTIFIER_USED

[["Update", ["identifier:instrument", 3, 32, 3, 42], "Instrument"]]

ISISScientificComputing/autoreduce@9457bbf6c25180de11dec9b9fe5991628c48a88a

autoreduce

69815b692c7990e7d302c041d316afe3cd760e27

9457bbf6c25180de11dec9b9fe5991628c48a88a

autoreduce_webapp/reduction_viewer/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -73,7 +73,7 @@ def run_list(request): instruments = [] with ICATCommunication(AUTH='uows',SESSION={'sessionid':request.session.get('sessionid')}) as icat: if request.user.is_superuser: - instrument_names = Instrument.objects.values_list('name', flat=true) + instrument_names = Instrument.objects.values_list('name', flat=True) else: instrument_names = icat.get_valid_instruments(int(request.user.username)) owned_instruments = request.session.get('owned_instruments', default=[])

instrument_names = Instrument . objects . values_list ( 'name' , flat = true )

instrument_names = Instrument . objects . values_list ( 'name' , flat = True )

SINGLE_TOKEN

[["Insert", ["keyword_argument", 3, 71, 3, 80], ["true:True", "T"], 2], ["Delete", ["identifier:true", 3, 76, 3, 80]]]

ISISScientificComputing/autoreduce@69815b692c7990e7d302c041d316afe3cd760e27

autoreduce

5ef74024cba07aad2f516bd3e6cbd3ef64786d09

205fa349c2a1aad9bfcb03f374309ae9035937e2

rpmbuild/autoreduce-mq/usr/bin/PostProcessAdmin.py

https://github.com/ISISScientificComputing/autoreduce

@@ -149,7 +149,7 @@ class PostProcessAdmin: return # specify directory where autoreduction output goes - run_output_dir = TEMP_ROOT_DIRECTORY + instrument_dir[:instrument_dir.find('/'+ self.data['run_number'])+1] + run_output_dir = TEMP_ROOT_DIRECTORY + instrument_dir[:instrument_dir.find('/'+ str(self.data['run_number']))+1] reduce_result_dir = TEMP_ROOT_DIRECTORY + instrument_dir + "/results/" reduce_result_dir_tail_length = len("/results") if not os.path.isdir(reduce_result_dir):

run_output_dir = TEMP_ROOT_DIRECTORY + instrument_dir [ : instrument_dir . find ( '/' + self . data [ 'run_number' ] ) + 1 ]

run_output_dir = TEMP_ROOT_DIRECTORY + instrument_dir [ : instrument_dir . find ( '/' + str ( self . data [ 'run_number' ] ) ) + 1 ]

ADD_FUNCTION_AROUND_EXPRESSION

[["Insert", ["binary_operator", 3, 88, 3, 116], ["call", "N0"], 2], ["Insert", "N0", ["identifier:str", "T"], 0], ["Insert", "N0", ["argument_list", "N1"], 1], ["Insert", "N1", ["(:(", "T"], 0], ["Move", "N1", ["subscript", 3, 93, 3, 116], 1], ["Insert", "N1", ["):)", "T"], 2]]

ISISScientificComputing/autoreduce@5ef74024cba07aad2f516bd3e6cbd3ef64786d09

autoreduce

89769e28fa80959015bf4fc5323424a94509e555

904087f6085de084930f560c1e0d5c80651ad4f9

rpmbuild/autoreduce-mq/usr/bin/queueProcessor.py

https://github.com/ISISScientificComputing/autoreduce

@@ -29,7 +29,7 @@ class Listener(object): self.procList.append(proc) if len(self.procList) > 4: - logger.info("There are " + str(len(self.procList)) + " processors running at the moment, wait for a second") + logger.info("There are " + str(len(self.procList)) + " processes running at the moment, wait for a second") while len(self.procList) > 4: time.sleep(1.0)

logger . info ( "There are " + str ( len ( self . procList ) ) + " processors running at the moment, wait for a second" )

logger . info ( "There are " + str ( len ( self . procList ) ) + " processes running at the moment, wait for a second" )

CHANGE_BINARY_OPERAND

[["Update", ["string:\" processors running at the moment, wait for a second\"", 3, 64, 3, 118], "\" processes running at the moment, wait for a second\""]]

ISISScientificComputing/autoreduce@89769e28fa80959015bf4fc5323424a94509e555

autoreduce

283d401db6886b615f86925208b705f5828be55a

f42898310ffc5acfa2c35b0398d0bd57d0b96c69

rpmbuild/autoreduce-mq/usr/bin/queueProcessor.py

https://github.com/ISISScientificComputing/autoreduce

@@ -24,7 +24,7 @@ class Listener(object): processNum = 4 #processes allowed to run at one time destination = headers['destination'] - logger.info("Received frame destination: " + destination) + logger.debug("Received frame destination: " + destination) logger.debug("Received frame body (data)" + data) logger.debug("Calling: %s %s %s %s" % ("python", "/usr/bin/PostProcessAdmin.py", destination, data))

logger . info ( "Received frame destination: " + destination )

logger . debug ( "Received frame destination: " + destination )

WRONG_FUNCTION_NAME

[["Update", ["identifier:info", 3, 16, 3, 20], "debug"]]

ISISScientificComputing/autoreduce@283d401db6886b615f86925208b705f5828be55a

autoreduce

9b01196a1ba27dca8f46d8a2201b4ea07cfb070c

7a617d7dd272a2b9453e9c61f47196ff24e29f12

ISISendOfRunMonitor.py

https://github.com/ISISScientificComputing/autoreduce

@@ -7,7 +7,7 @@ INST_FOLDER = "\\\\isis\inst$\NDX%s\Instrument" DATA_LOC = "\data\cycle_%s\\" SUMMARY_LOC = "\logs\journal\SUMMARY.txt" LAST_RUN_LOC = "\logs\lastrun.txt" -LOG_FILE = "C:\\monitor_log.txt" +LOG_FILE = "xx\\monitor_log.txt" INSTRUMENTS = [{'name': 'LET', 'use_nexus': True}, {'name': 'MERLIN', 'use_nexus': False}, {'name': 'MARI', 'use_nexus': False},

LOG_FILE = "C:\\monitor_log.txt"

LOG_FILE = "xx\\monitor_log.txt"

CHANGE_STRING_LITERAL

[["Update", ["string:\"C:\\\\monitor_log.txt\"", 3, 12, 3, 33], "\"xx\\\\monitor_log.txt\""]]

ISISScientificComputing/autoreduce@9b01196a1ba27dca8f46d8a2201b4ea07cfb070c

autoreduce

d3453c7708a78699bae1d3b85ab82d885e5a7eb6

3e758cdb922258479d4c066934e62e3764443c6d

rpmbuild/autoreduce-mq/usr/bin/PostProcessAdmin.py

https://github.com/ISISScientificComputing/autoreduce

@@ -173,7 +173,7 @@ class PostProcessAdmin: if not os.path.isdir(reduce_result_dir): os.makedirs(reduce_result_dir) - log_dir = reduce_result_dir + "reduction_log/" + log_dir = reduce_result_dir + "/reduction_log/" if not os.path.exists(log_dir): os.makedirs(log_dir)

log_dir = reduce_result_dir + "reduction_log/"

log_dir = reduce_result_dir + "/reduction_log/"

CHANGE_BINARY_OPERAND

[["Update", ["string:\"reduction_log/\"", 3, 43, 3, 59], "\"/reduction_log/\""]]

ISISScientificComputing/autoreduce@d3453c7708a78699bae1d3b85ab82d885e5a7eb6

autoreduce

ff0443e32b4ef38ea6ef8021a063d09450efb603

81b24e1f75c1243f63c1dde7e6dae526f67cc0c9

WebApp/autoreduce_webapp/reduction_viewer/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -61,7 +61,7 @@ def index(request): else: if 'sessionid' in request.session.keys(): authenticated = request.user.is_authenticated \ - and UOWSClient().check_session(request.session['sessionId']) + and UOWSClient().check_session(request.session['sessionid']) if authenticated: if request.GET.get('next'):

else : if 'sessionid' in request . session . keys ( ) : authenticated = request . user . is_authenticated and UOWSClient ( ) . check_session ( request . session [ 'sessionId' ] )

else : if 'sessionid' in request . session . keys ( ) : authenticated = request . user . is_authenticated and UOWSClient ( ) . check_session ( request . session [ 'sessionid' ] )

CHANGE_STRING_LITERAL

[["Update", ["string:'sessionId'", 3, 76, 3, 87], "'sessionid'"]]

ISISScientificComputing/autoreduce@ff0443e32b4ef38ea6ef8021a063d09450efb603

autoreduce

78227553aa1fc580520dceff77a54e00468055da

5aad464131acefa2c5f750138b72ba9e47f48076

scripts/manual_operations/tests/test_manual_remove.py

https://github.com/ISISScientificComputing/autoreduce

@@ -150,7 +150,7 @@ class TestManualRemove(unittest.TestCase): self.gem_object_2] self.assertEqual(2, len(self.manual_remove.to_delete['123'])) mock_input.return_value = '1,2' - mock_validate_csv.return_value = (True, [1, 2]) + mock_validate_csv.return_value = (True, ['1', '2']) self.manual_remove.multiple_versions_found('123') # We said to delete version 2 so it should be the only entry for that run number self.assertEqual(2, len(self.manual_remove.to_delete['123']))

mock_validate_csv . return_value = ( True , [ 1 , 2 ] )

mock_validate_csv . return_value = ( True , [ '1' , '2' ] )

SINGLE_STMT

[["Insert", ["list", 3, 49, 3, 55], ["string:'1'", "T"], 1], ["Insert", ["list", 3, 49, 3, 55], ["string:'2'", "T"], 4], ["Delete", ["integer:1", 3, 50, 3, 51]], ["Delete", ["integer:2", 3, 53, 3, 54]]]

ISISScientificComputing/autoreduce@78227553aa1fc580520dceff77a54e00468055da

autoreduce

015bfc5163d4a208e00f99c1589be1cad98af12b

556cdb19e88f374ad977b2740ed1088daa160e6f

queue_processors/autoreduction_processor/reduction_service.py

https://github.com/ISISScientificComputing/autoreduce

@@ -190,7 +190,7 @@ def reduce(reduction_dir, temp_dir, datafile, script, run_number): try: log_stream_handler = logging.StreamHandler(log_stream) LOGGER.addHandler(log_stream_handler) - with channels_redirected(temp_dir.script_log, temp_dir.manig_log, log_stream): + with channels_redirected(temp_dir.script_log, temp_dir.mantid_log, log_stream): additional_output_dirs = script.run(datafile, temp_dir) LOGGER.removeHandler(log_stream_handler) except Exception as ex:

with channels_redirected ( temp_dir . script_log , temp_dir . manig_log , log_stream ) : additional_output_dirs = script . run ( datafile , temp_dir )

with channels_redirected ( temp_dir . script_log , temp_dir . mantid_log , log_stream ) : additional_output_dirs = script . run ( datafile , temp_dir )

CHANGE_ATTRIBUTE_USED

[["Update", ["identifier:manig_log", 3, 64, 3, 73], "mantid_log"]]

ISISScientificComputing/autoreduce@015bfc5163d4a208e00f99c1589be1cad98af12b

autoreduce

d0c8964b93d1b088c6b0b297db5f5654061e78e9

f019c700d3ca17fb8a9c068a5257b5f936c32b5b

webtests/configuration.py

https://github.com/ISISScientificComputing/autoreduce

@@ -15,7 +15,7 @@ from shutil import copyfile from utils.project.structure import get_project_root -CONFIG_PATH = Path(get_project_root(), "webtests/confibg.json") +CONFIG_PATH = Path(get_project_root(), "webtests/config.json") TEMP_CONFIG_PATH = Path(get_project_root(), "webtests/temp_config.json")

CONFIG_PATH = Path ( get_project_root ( ) , "webtests/confibg.json" )

CONFIG_PATH = Path ( get_project_root ( ) , "webtests/config.json" )

CHANGE_STRING_LITERAL

[["Update", ["string:\"webtests/confibg.json\"", 3, 40, 3, 63], "\"webtests/config.json\""]]

ISISScientificComputing/autoreduce@d0c8964b93d1b088c6b0b297db5f5654061e78e9

autoreduce

7161a1e9082ea058555c65ecc1462d35048f1f9f

03fe5fe5a6d56e8aa01745908a61320a50bd6d83

webtests/tests/base_tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -67,7 +67,7 @@ class BaseTestCase(unittest.TestCase): if hasattr(self, '_outcome'): result = self.defaultTestResult() self._feedErrorsToResult(result, self._outcome.errors) - return len(result.failures) > 0 + return len(result.failures) > 0 or len(result.errors) > 0 return False

return len ( result . failures ) > 0

return len ( result . failures ) > 0 or len ( result . errors ) > 0

SINGLE_STMT

[["Insert", ["return_statement", 3, 13, 3, 44], ["boolean_operator", "N0"], 1], ["Move", "N0", ["comparison_operator", 3, 20, 3, 44], 0], ["Insert", "N0", ["or:or", "T"], 1], ["Insert", "N0", ["comparison_operator", "N1"], 2], ["Insert", "N1", ["call", "N2"], 0], ["Insert", "N1", [">:>", "T"], 1], ["Insert", "N1", ["integer:0", "T"], 2], ["Insert", "N2", ["identifier:len", "T"], 0], ["Insert", "N2", ["argument_list", "N3"], 1], ["Insert", "N3", ["(:(", "T"], 0], ["Insert", "N3", ["attribute", "N4"], 1], ["Insert", "N3", ["):)", "T"], 2], ["Insert", "N4", ["identifier:result", "T"], 0], ["Insert", "N4", [".:.", "T"], 1], ["Insert", "N4", ["identifier:errors", "T"], 2]]

ISISScientificComputing/autoreduce@7161a1e9082ea058555c65ecc1462d35048f1f9f

autoreduce

1691f0b1e4e2f62799bad0a3adf3c7c9c81d8ea8

d4d9a9258c64c54cd7d045c464e82a98e9b47b08

systemtests/test_end_to_end.py

https://github.com/ISISScientificComputing/autoreduce

@@ -205,7 +205,7 @@ if os.name != 'nt': - remove.remove(instrument, run_number) + remove.remove(instrument, run_number, delete_all_versions=False) @staticmethod def _delete_reduction_directory():

remove . remove ( instrument , run_number )

remove . remove ( instrument , run_number , delete_all_versions = False )

SAME_FUNCTION_MORE_ARGS

[["Insert", ["argument_list", 0, 26, 0, 50], [",:,", "T"], 4], ["Insert", ["argument_list", 0, 26, 0, 50], ["keyword_argument", "N0"], 5], ["Insert", "N0", ["identifier:delete_all_versions", "T"], 0], ["Insert", "N0", ["=:=", "T"], 1], ["Insert", "N0", ["false:False", "T"], 2]]

ISISScientificComputing/autoreduce@1691f0b1e4e2f62799bad0a3adf3c7c9c81d8ea8

autoreduce

fb6acc92bb63c43aae7be78dd0264cfa6eb1ec8d

8850270e604d706d9e17c0faf1eca1e5adfcae8c

plotting/plot_handler.py

https://github.com/ISISScientificComputing/autoreduce

@@ -115,7 +115,7 @@ class PlotHandler: client = SFTPClient() for plot_file in _existing_plot_files: # Generate paths to data on server and destination on local machine - _server_path = self.server_dir + plot_file + _server_path = f"{self.server_dir}/{plot_file}" _local_path = os.path.join(self.static_graph_dir, plot_file) try:

_server_path = self . server_dir + plot_file

_server_path = f"{self.server_dir}/{plot_file}"

SINGLE_STMT

[["Insert", ["assignment", 3, 17, 3, 59], ["string:f\"{self.server_dir}/{plot_file}\"", "T"], 2], ["Delete", ["identifier:self", 3, 32, 3, 36]], ["Delete", [".:.", 3, 36, 3, 37]], ["Delete", ["identifier:server_dir", 3, 37, 3, 47]], ["Delete", ["attribute", 3, 32, 3, 47]], ["Delete", ["+:+", 3, 48, 3, 49]], ["Delete", ["identifier:plot_file", 3, 50, 3, 59]], ["Delete", ["binary_operator", 3, 32, 3, 59]]]

ISISScientificComputing/autoreduce@fb6acc92bb63c43aae7be78dd0264cfa6eb1ec8d

autoreduce

d52cd38b83a28a6c2fd45703e1241d886a9307dd

26b0efdcdc221a9af5f8ce48b6f0de38cefaa7fc

queue_processors/queue_processor/handle_message.py

https://github.com/ISISScientificComputing/autoreduce

@@ -106,7 +106,7 @@ class HandleMessage: raise InvalidStateException("Script text for current instrument is null") # activate instrument if script was found - instrument = self.activate_db_inst(message.instrument) + instrument = self.activate_db_inst(instrument) self.safe_save(reduction_run) # Create a new data location entry which has a foreign key linking it to the current

instrument = self . activate_db_inst ( message . instrument )

instrument = self . activate_db_inst ( instrument )

SINGLE_STMT

[["Move", ["argument_list", 3, 43, 3, 63], ["identifier:instrument", 3, 52, 3, 62], 1], ["Delete", ["identifier:message", 3, 44, 3, 51]], ["Delete", [".:.", 3, 51, 3, 52]], ["Delete", ["attribute", 3, 44, 3, 62]]]

ISISScientificComputing/autoreduce@d52cd38b83a28a6c2fd45703e1241d886a9307dd

autoreduce

766469c2eb2f61e3df4231699678a1bfcb7e8c1c

b006020195682395ae7c80f79bf288e45dfd9203

queue_processors/queue_processor/reduction_runner/reduction_runner.py

https://github.com/ISISScientificComputing/autoreduce

@@ -147,7 +147,7 @@ class ReductionRunner: def main(): """ Main method. """ - data, temp_output_file = sys.argv[1:3] # pylint: disable=unbalanced-tuple-unpacking + data, temp_output_file = sys.argv[1], sys.argv[2] try: message = Message() message.populate(data)

data , temp_output_file = sys . argv [ 1 : 3 ]

data , temp_output_file = sys . argv [ 1 ] , sys . argv [ 2 ]

SINGLE_STMT

[["Insert", ["assignment", 3, 5, 3, 43], ["expression_list", "N0"], 2], ["Insert", "N0", ["subscript", "N1"], 0], ["Insert", "N0", [",:,", "T"], 1], ["Insert", "N0", ["subscript", "N2"], 2], ["Move", "N1", ["attribute", 3, 30, 3, 38], 0], ["Move", "N1", ["[:[", 3, 38, 3, 39], 1], ["Move", "N1", ["integer:1", 3, 39, 3, 40], 2], ["Insert", "N1", ["]:]", "T"], 3], ["Insert", "N2", ["attribute", "N3"], 0], ["Insert", "N2", ["[:[", "T"], 1], ["Insert", "N2", ["integer:2", "T"], 2], ["Move", "N2", ["]:]", 3, 42, 3, 43], 3], ["Insert", "N3", ["identifier:sys", "T"], 0], ["Insert", "N3", [".:.", "T"], 1], ["Insert", "N3", ["identifier:argv", "T"], 2], ["Delete", [":::", 3, 40, 3, 41]], ["Delete", ["integer:3", 3, 41, 3, 42]], ["Delete", ["slice", 3, 39, 3, 42]], ["Delete", ["subscript", 3, 30, 3, 43]]]

ISISScientificComputing/autoreduce@766469c2eb2f61e3df4231699678a1bfcb7e8c1c

aetherbot

6ce8476e06c75539acf5bd219d0079b3414527b7

a8342bd37b5faee65753e915949c3162463627b4

plugins/github.py

https://github.com/ihatevim/aetherbot

@@ -24,7 +24,7 @@ def issues(text): user = j["user"]["login"] title = j["title"] summary = textutils.truncate(j["body"]) - if j["state"] is "open": + if j["state"] == "open": state = "\x033\x02OPEN\x02\x0f" else: state = "\x034\x02CLOSED\x02\x0f by {}".format(j["closed_by"]["login"])

if j [ "state" ] is "open" : state = "\x033\x02OPEN\x02\x0f" else : state = "\x034\x02CLOSED\x02\x0f by {}" . format ( j [ "closed_by" ] [ "login" ] )

if j [ "state" ] == "open" : state = "\x033\x02OPEN\x02\x0f" else : state = "\x034\x02CLOSED\x02\x0f by {}" . format ( j [ "closed_by" ] [ "login" ] )

CHANGE_BINARY_OPERATOR

[["Insert", ["comparison_operator", 3, 12, 3, 32], ["==:==", "T"], 1], ["Delete", ["is:is", 3, 23, 3, 25]]]

ihatevim/aetherbot@6ce8476e06c75539acf5bd219d0079b3414527b7

Fix github.py state check Made a boo-boo when checking if an issue is open in github.py. This quick commit fixes that.

aetherbot

3129fb8cd45fe44685492f19d0ef7ba85ab1b409

5a0ee95ca17a574b8f92ef9d648ffe6429b6bdda

cloudbot/core/pluginmanager.py

https://github.com/ihatevim/aetherbot

@@ -369,7 +369,7 @@ class PluginManager: try: if sieve.threaded: - result = yield from self.bot.loop.run_in_executor(sieve.function, self.bot, event, hook) + result = yield from self.bot.loop.run_in_executor(None, sieve.function, self.bot, event, hook) else: result = yield from sieve.function(self.bot, event, hook) except Exception:

result = yield from self . bot . loop . run_in_executor ( sieve . function , self . bot , event , hook )

result = yield from self . bot . loop . run_in_executor ( None , sieve . function , self . bot , event , hook )

SAME_FUNCTION_MORE_ARGS

[["Insert", ["argument_list", 2, 66, 2, 105], ["none:None", "T"], 1], ["Insert", ["argument_list", 2, 66, 2, 105], [",:,", "T"], 2]]

ihatevim/aetherbot@3129fb8cd45fe44685492f19d0ef7ba85ab1b409

95729cui

554b1d40127173cb1297442f9368d24e97885403

babce6027d290b946d81a2a3bbefbbd71a7968e4

main.py

https://github.com/wwyiyi/95729cui

@@ -97,7 +97,7 @@ class ShoppingBot: userInput = raw_input() os.system('clear') - if len(userinput) < 0: + if userInput == None or len(userInput) <= 0: continue # normal flow # If the user wants to exit

if len ( userinput ) < 0 : continue

if userInput == None or len ( userInput ) <= 0 : continue

SINGLE_STMT

[["Insert", ["if_statement", 3, 13, 4, 25], ["boolean_operator", "N0"], 1], ["Insert", "N0", ["comparison_operator", "N1"], 0], ["Insert", "N0", ["or:or", "T"], 1], ["Move", "N0", ["comparison_operator", 3, 16, 3, 34], 2], ["Insert", "N1", ["identifier:userInput", "T"], 0], ["Insert", "N1", ["==:==", "T"], 1], ["Insert", "N1", ["none:None", "T"], 2], ["Insert", ["comparison_operator", 3, 16, 3, 34], ["<=:<=", "T"], 1], ["Update", ["identifier:userinput", 3, 20, 3, 29], "userInput"], ["Delete", ["<:<", 3, 31, 3, 32]]]

wwyiyi/95729cui@554b1d40127173cb1297442f9368d24e97885403

fixed zero length input

95729cui

5e6f1496b7b69f2d3fa22845a6fbd2ededb4395d

554b1d40127173cb1297442f9368d24e97885403

main.py

https://github.com/wwyiyi/95729cui

@@ -60,7 +60,7 @@ class ShoppingBot: print('Bye') def askForQuantity(self, item): - print(colored('We only sell by pounds. How many ' + item.unit + " of " + item.itemName + " do you want?",' blue')) + print(colored('We only sell by pounds. How many ' + item.unit + " of " + item.itemName + " do you want?",'blue')) userInput = raw_input() request = self.ai.text_request() request.lang = 'en' # optional, default value equal 'en'

print ( colored ( 'We only sell by pounds. How many ' + item . unit + " of " + item . itemName + " do you want?" , ' blue' ) )

print ( colored ( 'We only sell by pounds. How many ' + item . unit + " of " + item . itemName + " do you want?" , 'blue' ) )

CHANGE_STRING_LITERAL

[["Update", ["string:' blue'", 3, 114, 3, 121], "'blue'"]]

wwyiyi/95729cui@5e6f1496b7b69f2d3fa22845a6fbd2ededb4395d

fixed another bug

95729cui

8d87b6e5cdf959083919a2607f8d919688497395

707d556dc7ff2e9836c4d00055663bcdfb0c4793

shoppingCart.py

https://github.com/wwyiyi/95729cui

@@ -23,7 +23,7 @@ class Cart(): print (item + "not in shopping cart! ") return else: - self.items[item.itemName].setQuantity(items[item.itemName].getQuantity() - amount) + self.items[item.itemName].setQuantity(self.items[item.itemName].getQuantity() - amount) return

else : self . items [ item . itemName ] . setQuantity ( items [ item . itemName ] . getQuantity ( ) - amount )

else : self . items [ item . itemName ] . setQuantity ( self . items [ item . itemName ] . getQuantity ( ) - amount )

SINGLE_STMT

[["Insert", ["subscript", 3, 51, 3, 71], ["attribute", "N0"], 0], ["Insert", "N0", ["identifier:self", "T"], 0], ["Insert", "N0", [".:.", "T"], 1], ["Move", "N0", ["identifier:items", 3, 51, 3, 56], 2]]

wwyiyi/95729cui@8d87b6e5cdf959083919a2607f8d919688497395

Fix shoppingCart.py

kivy_media_player

2e57f7a775402266bd380a511f68fbfdb028cecf

2b3f3197eb721c1ea5b261b587261b9bdb33e18d

videocontroller.py

https://github.com/TalhaTZA/kivy_media_player

@@ -24,7 +24,7 @@ class VideoController(FloatLayout): def on_touch_down(self,touch): if self.collide_point(*touch.pos): - if hasattr(self,'animationVB'): + if hasattr(self,'aimationVB'): self.aimationVB.cancel(self.control_bar) self.play_pause.state='normal' return super().on_touch_down(touch) \ No newline at end of file

if hasattr ( self , 'animationVB' ) : self . aimationVB . cancel ( self . control_bar )

if hasattr ( self , 'aimationVB' ) : self . aimationVB . cancel ( self . control_bar )

CHANGE_STRING_LITERAL

[["Update", ["string:'animationVB'", 3, 29, 3, 42], "'aimationVB'"]]

TalhaTZA/kivy_media_player@2e57f7a775402266bd380a511f68fbfdb028cecf

fixed a typo which was causing a bug

builder

6ef88f03edc4d793a1d0718434a9a7c8f2a8344f

efcf018dcf688c7fed43193f884aaf7b2704d9e0

tools/graph.py

https://github.com/gastonfeng/builder

@@ -54,7 +54,7 @@ def process_order(self): if roots: roots.append(self.start) - if clean_tree: + if clean_tree and self.start in self.tree_list and len(self.tree_list[self.start]): one_level_el = self.tree_list[self.start][0][1] base = self.result[one_level_el]['y']# * 2 / (index + 2) else:

if clean_tree : one_level_el = self . tree_list [ self . start ] [ 0 ] [ 1 ] base = self . result [ one_level_el ] [ 'y' ] else :

if clean_tree and self . start in self . tree_list and len ( self . tree_list [ self . start ] ) : one_level_el = self . tree_list [ self . start ] [ 0 ] [ 1 ] base = self . result [ one_level_el ] [ 'y' ] else :

SINGLE_STMT

[["Insert", ["if_statement", 3, 13, 6, 18], ["boolean_operator", "N0"], 1], ["Insert", "N0", ["boolean_operator", "N1"], 0], ["Insert", "N0", ["and:and", "T"], 1], ["Insert", "N0", ["call", "N2"], 2], ["Move", "N1", ["identifier:clean_tree", 3, 16, 3, 26], 0], ["Insert", "N1", ["and:and", "T"], 1], ["Insert", "N1", ["comparison_operator", "N3"], 2], ["Insert", "N2", ["identifier:len", "T"], 0], ["Insert", "N2", ["argument_list", "N4"], 1], ["Insert", "N3", ["attribute", "N5"], 0], ["Insert", "N3", ["in:in", "T"], 1], ["Insert", "N3", ["attribute", "N6"], 2], ["Insert", "N4", ["(:(", "T"], 0], ["Insert", "N4", ["subscript", "N7"], 1], ["Insert", "N4", ["):)", "T"], 2], ["Insert", "N5", ["identifier:self", "T"], 0], ["Insert", "N5", [".:.", "T"], 1], ["Insert", "N5", ["identifier:start", "T"], 2], ["Insert", "N6", ["identifier:self", "T"], 0], ["Insert", "N6", [".:.", "T"], 1], ["Insert", "N6", ["identifier:tree_list", "T"], 2], ["Insert", "N7", ["attribute", "N8"], 0], ["Insert", "N7", ["[:[", "T"], 1], ["Insert", "N7", ["attribute", "N9"], 2], ["Insert", "N7", ["]:]", "T"], 3], ["Insert", "N8", ["identifier:self", "T"], 0], ["Insert", "N8", [".:.", "T"], 1], ["Insert", "N8", ["identifier:tree_list", "T"], 2], ["Insert", "N9", ["identifier:self", "T"], 0], ["Insert", "N9", [".:.", "T"], 1], ["Insert", "N9", ["identifier:start", "T"], 2]]

gastonfeng/builder@6ef88f03edc4d793a1d0718434a9a7c8f2a8344f

graph issues

aetherbot

8e545b3a3155d42b196d66b32eb29b7604c1721d

ea39a6fbb96906769cd10d820231724edc9d9dbf

plugins/namegen.py

https://github.com/ihatevim/aetherbot

@@ -36,7 +36,7 @@ class NameGenerator(object): for name_part in name_parts: part = random.choice(self.parts[name_part]) - name = name.replace("\{{}\}".format(name_part), part) + name = name.replace("{" + name_part + "}", part) return name

name = name . replace ( "\{{}\}" . format ( name_part ) , part )

name = name . replace ( "{" + name_part + "}" , part )

SINGLE_STMT

[["Insert", ["argument_list", 3, 32, 3, 66], ["binary_operator", "N0"], 1], ["Move", ["argument_list", 3, 32, 3, 66], ["):)", 3, 58, 3, 59], 5], ["Insert", "N0", ["binary_operator", "N1"], 0], ["Insert", "N0", ["+:+", "T"], 1], ["Insert", "N0", ["string:\"}\"", "T"], 2], ["Update", ["string:\"\\{{}\\}\"", 3, 33, 3, 41], "\"{\""], ["Move", "N1", ["string:\"\\{{}\\}\"", 3, 33, 3, 41], 0], ["Insert", "N1", ["+:+", "T"], 1], ["Move", "N1", ["identifier:name_part", 3, 49, 3, 58], 2], ["Delete", [".:.", 3, 41, 3, 42]], ["Delete", ["identifier:format", 3, 42, 3, 48]], ["Delete", ["attribute", 3, 33, 3, 48]], ["Delete", ["(:(", 3, 48, 3, 49]], ["Delete", ["argument_list", 3, 48, 3, 59]], ["Delete", ["call", 3, 33, 3, 59]], ["Delete", ["):)", 3, 65, 3, 66]]]

ihatevim/aetherbot@8e545b3a3155d42b196d66b32eb29b7604c1721d

aetherbot

cb7f9b736f54ed78f28b2c26cad2db8a457bf05c

ecab6076ea1e85c743078f218b6ed6126233129b

plugins/namegen.py

https://github.com/ihatevim/aetherbot

@@ -9,7 +9,7 @@ GEN_DIR = "./plugins/data/name_files/" def get_generator(_json): data = json.loads(_json) return textgen.TextGenerator(data["name"], data["templates"], - data["default_templates"], data["parts"]) + data["parts"], data["default_templates"]) @hook.command(autohelp=False)

return textgen . TextGenerator ( data [ "name" ] , data [ "templates" ] , data [ "default_templates" ] , data [ "parts" ] )

return textgen . TextGenerator ( data [ "name" ] , data [ "templates" ] , data [ "parts" ] , data [ "default_templates" ] )

SAME_FUNCTION_SWAP_ARGS

[["Move", ["subscript", 3, 9, 3, 34], ["argument_list", 2, 33, 3, 50], 6], ["Move", ["subscript", 3, 36, 3, 49], ["argument_list", 2, 33, 3, 50], 5]]

ihatevim/aetherbot@cb7f9b736f54ed78f28b2c26cad2db8a457bf05c

aetherbot

1bba6262bcfe7b6fe6d2ac87d091e9334dd5a023

d9f613f6f4b8710d055d096c495b8d089a7ac490

plugins/valuesounds.py

https://github.com/ihatevim/aetherbot

@@ -10,7 +10,7 @@ def get_sound_info(game, search): except HTTPError as e: return "Error: " + json.loads(e.read())["error"] items = [] - for item in data: + for item in data["items"]: if "music" in game: textsplit = item["text"].split('"') text = ""

for item in data : if "music" in game : textsplit = item [ "text" ] . split ( '"' ) text = ""

for item in data [ "items" ] : if "music" in game : textsplit = item [ "text" ] . split ( '"' ) text = ""

SINGLE_STMT

[["Insert", ["for_statement", 3, 5, 6, 22], ["subscript", "N0"], 3], ["Move", "N0", ["identifier:data", 3, 17, 3, 21], 0], ["Insert", "N0", ["[:[", "T"], 1], ["Insert", "N0", ["string:\"items\"", "T"], 2], ["Insert", "N0", ["]:]", "T"], 3]]

ihatevim/aetherbot@1bba6262bcfe7b6fe6d2ac87d091e9334dd5a023

aetherbot

764a74a3eae4550cee34b5f75ff66d04288f1b82

5867cb05c7b533e401cdda8564630ba8f710fc4e

plugins/youtube.py

https://github.com/ihatevim/aetherbot

@@ -42,7 +42,7 @@ def get_video_description(video_id): out += ' - \x02%s\x02 views' % format(data['viewCount'], ",d") try: - uploader = http.get_json(base_url + "users/{}?alt=json".format(data["uploader"]))["entry"]["author"]["name"]["$t"] + uploader = http.get_json(base_url + "users/{}?alt=json".format(data["uploader"]))["entry"]["author"][0]["name"]["$t"] except: uploader = data["uploader"]

uploader = http . get_json ( base_url + "users/{}?alt=json" . format ( data [ "uploader" ] ) ) [ "entry" ] [ "author" ] [ "name" ] [ "$t" ]

uploader = http . get_json ( base_url + "users/{}?alt=json" . format ( data [ "uploader" ] ) ) [ "entry" ] [ "author" ] [ 0 ] [ "name" ] [ "$t" ]

SINGLE_STMT

[["Move", ["subscript", 3, 20, 3, 109], ["subscript", 3, 20, 3, 109], 0], ["Insert", ["subscript", 3, 20, 3, 109], ["[:[", "T"], 1], ["Insert", ["subscript", 3, 20, 3, 109], ["integer:0", "T"], 2], ["Insert", ["subscript", 3, 20, 3, 109], ["]:]", "T"], 3]]

ihatevim/aetherbot@764a74a3eae4550cee34b5f75ff66d04288f1b82

Fixed uploader name display for Youtube's new display names

aetherbot

7474904e974d5b7e8ddfede7ae48135e7a420427

a5d5845faf37621fdffaecbfc130b7d2b5c19b1f

plugins/lmgtfy.py

https://github.com/ihatevim/aetherbot

@@ -6,7 +6,7 @@ from util import hook, web, http def lmgtfy(inp): """lmgtfy [phrase] - Posts a google link for the specified phrase""" - link = "http://lmgtfy.com/?q={}".format(http.quote_plus(inp)) + link = u"http://lmgtfy.com/?q={}".format(http.quote_plus(inp)) try: return web.isgd(link)

link = "http://lmgtfy.com/?q={}" . format ( http . quote_plus ( inp ) )

link = u"http://lmgtfy.com/?q={}" . format ( http . quote_plus ( inp ) )

CHANGE_STRING_LITERAL

[["Update", ["string:\"http://lmgtfy.com/?q={}\"", 3, 12, 3, 37], "u\"http://lmgtfy.com/?q={}\""]]

ihatevim/aetherbot@7474904e974d5b7e8ddfede7ae48135e7a420427

aetherbot

a2c5964438cae968a805270f5fb6ee4e5834e9fd

b6c3a233eb1bc6a45dbdaf5dc42434d197a0b408

core/main.py

https://github.com/ihatevim/aetherbot

@@ -32,7 +32,7 @@ class Input(dict): """sends an ctcp to the current channel/user or a specific channel/user""" conn.ctcp(target, ctcp_type, message) - def notice(message, target=chan): + def notice(message, target=user): """sends a notice to the current channel/user or a specific channel/user""" conn.cmd('NOTICE', [target, message])

def notice ( message , target = chan ) : """sends a notice to the current channel/user or a specific channel/user""" conn . cmd ( 'NOTICE' , [ target , message ] )

def notice ( message , target = user ) : """sends a notice to the current channel/user or a specific channel/user""" conn . cmd ( 'NOTICE' , [ target , message ] )

CHANGE_IDENTIFIER_USED

[["Update", ["identifier:chan", 3, 36, 3, 40], "user"]]

ihatevim/aetherbot@a2c5964438cae968a805270f5fb6ee4e5834e9fd

Hell hath no fury like an IRC user scorned. (fixed notices)

aetherbot

c9c3fbf67127681a1993b005ffcfed5a6e5d33f8

a2c5964438cae968a805270f5fb6ee4e5834e9fd

core/main.py

https://github.com/ihatevim/aetherbot

@@ -32,7 +32,7 @@ class Input(dict): """sends an ctcp to the current channel/user or a specific channel/user""" conn.ctcp(target, ctcp_type, message) - def notice(message, target=user): + def notice(message, target=nick): """sends a notice to the current channel/user or a specific channel/user""" conn.cmd('NOTICE', [target, message])

def notice ( message , target = user ) : """sends a notice to the current channel/user or a specific channel/user""" conn . cmd ( 'NOTICE' , [ target , message ] )

def notice ( message , target = nick ) : """sends a notice to the current channel/user or a specific channel/user""" conn . cmd ( 'NOTICE' , [ target , message ] )

CHANGE_IDENTIFIER_USED

[["Update", ["identifier:user", 3, 36, 3, 40], "nick"]]

ihatevim/aetherbot@c9c3fbf67127681a1993b005ffcfed5a6e5d33f8

properly fixed notices

aetherbot

df6e6d93c4377201f28bf00aca500ac0daba324b

d44a6ddb2301eaa0a124410c1591fc99ebf106a6

plugins/geoip.py

https://github.com/ihatevim/aetherbot

@@ -1,5 +1,5 @@ from util import hook, http -from lib import pygeoip +import pygeoip import os.path import json import gzip

from lib import pygeoip

import pygeoip

SINGLE_STMT

[["Insert", ["module", 0, 1, 5, 0], ["import_statement", "N0"], 1], ["Move", "N0", ["import:import", 1, 10, 1, 16], 0], ["Move", "N0", ["dotted_name", 1, 17, 1, 24], 1], ["Delete", ["from:from", 1, 1, 1, 5]], ["Delete", ["identifier:lib", 1, 6, 1, 9]], ["Delete", ["dotted_name", 1, 6, 1, 9]], ["Delete", ["import_from_statement", 1, 1, 1, 24]]]

ihatevim/aetherbot@df6e6d93c4377201f28bf00aca500ac0daba324b

aetherbot

05782766e9e61dacbe0874735bff4b734552a265

853b4b7db80bdf403fce9a73e96847fafa365220

core/main.py

https://github.com/ihatevim/aetherbot

@@ -22,7 +22,7 @@ class Input(dict): if target == nick: conn.msg(target, message) else: - conn.msg(target, "({}) {}".format(nick, message)) + conn.msg(target, u"({}) {}".format(nick, message)) def action(message, target=chan): """sends an action to the current channel/user or a specific channel/user"""

conn . msg ( target , "({}) {}" . format ( nick , message ) )

conn . msg ( target , u"({}) {}" . format ( nick , message ) )

CHANGE_STRING_LITERAL

[["Update", ["string:\"({}) {}\"", 3, 34, 3, 43], "u\"({}) {}\""]]

ihatevim/aetherbot@05782766e9e61dacbe0874735bff4b734552a265

aetherbot

df6ee28462e6b0ff06a111086d6ef2e16dfaf0b6

cd4b65de3dde53511bcf7099a767aadd265e40eb

plugins/reddit.py

https://github.com/ihatevim/aetherbot

@@ -53,7 +53,7 @@ def reddit(inp): # get the requested/random post - if id_num: + if id_num != None: try: item = data[id_num]["data"] except IndexError:

if id_num : try : item = data [ id_num ] [ "data" ] except IndexError :

if id_num != None : try : item = data [ id_num ] [ "data" ] except IndexError :

SINGLE_STMT

[["Insert", ["if_statement", 3, 5, 6, 27], ["comparison_operator", "N0"], 1], ["Move", "N0", ["identifier:id_num", 3, 8, 3, 14], 0], ["Insert", "N0", ["!=:!=", "T"], 1], ["Insert", "N0", ["none:None", "T"], 2]]

ihatevim/aetherbot@df6ee28462e6b0ff06a111086d6ef2e16dfaf0b6

aetherbot

b2c9f46d78a8a579388773b1e6fbd09e6b602842

186f272062e8fb2756b1a455467a2e97ad17ef51

plugins/github.py

https://github.com/ihatevim/aetherbot

@@ -6,7 +6,7 @@ shortcuts = {"cloudbot": "ClouDev/CloudBot"} def truncate(msg): - nmsg = msg.split(" ") + nmsg = msg.split() out = None x = 0 for i in nmsg:

nmsg = msg . split ( " " )

nmsg = msg . split ( )

SAME_FUNCTION_LESS_ARGS

[["Delete", ["string:\" \"", 3, 22, 3, 25]]]

ihatevim/aetherbot@b2c9f46d78a8a579388773b1e6fbd09e6b602842

aetherbot

df1023da55f88d9dffa05ca6456b4f896a0930c0

954ff2ad00728049b97d79a707d19dcda27b8d3d

plugins/minecraft_wiki.py

https://github.com/ihatevim/aetherbot

@@ -24,6 +24,6 @@ def mcwiki(inp): summary = " ".join(p.text_content().splitlines()) summary = re.sub("\[\d+\]", "", summary) summary = text.truncate_str(summary, 200) - return "{} :: {}".format(summary, url) + return u"{} :: {}".format(summary, url) return "Unknown Error."

return "{} :: {}" . format ( summary , url )

return u"{} :: {}" . format ( summary , url )

CHANGE_STRING_LITERAL

[["Update", ["string:\"{} :: {}\"", 3, 20, 3, 30], "u\"{} :: {}\""]]

ihatevim/aetherbot@df1023da55f88d9dffa05ca6456b4f896a0930c0

aetherbot

694cbbe81ffe1552232bb81c462622c3093de397

e8876c2c48740dbcc6262515923e5bbb8c264065

plugins/xkcd.py

https://github.com/ihatevim/aetherbot

@@ -4,7 +4,7 @@ from util import hook, http xkcd_re = (r'(.*:)//(www.xkcd.com|xkcd.com)(.*)', re.I) -months = {'1': 'January', 2: 'February', 3: 'March', 4: 'April', 5: 'May', 6: 'June', 7: 'July', 8: 'August', +months = {1: 'January', 2: 'February', 3: 'March', 4: 'April', 5: 'May', 6: 'June', 7: 'July', 8: 'August', 9: 'September', 10: 'October', 11: 'November', 12: 'December'}

months = { '1' : 'January' , 2 : 'February' , 3 : 'March' , 4 : 'April' , 5 : 'May' , 6 : 'June' , 7 : 'July' , 8 : 'August' , 9 : 'September' , 10 : 'October' , 11 : 'November' , 12 : 'December' }

months = { 1 : 'January' , 2 : 'February' , 3 : 'March' , 4 : 'April' , 5 : 'May' , 6 : 'June' , 7 : 'July' , 8 : 'August' , 9 : 'September' , 10 : 'October' , 11 : 'November' , 12 : 'December' }

CHANGE_CONSTANT_TYPE

[["Insert", ["pair", 3, 11, 3, 25], ["integer:1", "T"], 0], ["Delete", ["string:'1'", 3, 11, 3, 14]]]

ihatevim/aetherbot@694cbbe81ffe1552232bb81c462622c3093de397

Fix xkcd comics made in January throwing an error Previously, any commit written in January would throw an error because the array key for January was falsely '1' instead of the integer 1. This would lead to the moth name not being found and the error occuring. This PR fixes that problem by changing the key of January to the integer 1. **How to reproduce:** Ask your CloudBot to `xkcd Regular Expressions`, an error will be shown in console.

autoreduce

4e51cd23d233a3c9bf8eb4a6aecf1ea8f1b48e1b

f5759e8bbdffcc77c00ffff4271eb23f17e66314

WebApp/autoreduce_webapp/reduction_viewer/models.py

https://github.com/ISISScientificComputing/autoreduce

@@ -27,7 +27,7 @@ class Instrument(models.Model): """ :return: str representation of instrument """ - return f"{name}" + return f"{self.name}" class Experiment(models.Model):

return f"{name}"

return f"{self.name}"

CHANGE_STRING_LITERAL

[["Update", ["string:f\"{name}\"", 3, 16, 3, 25], "f\"{self.name}\""]]

ISISScientificComputing/autoreduce@4e51cd23d233a3c9bf8eb4a6aecf1ea8f1b48e1b

autoreduce

4290c25d70f13b92c35a7cc2c520d1ed6e6204bc

6ab27069f9db62c2e2e92500c5dfd6eca8cd3519

WebApp/autoreduce_webapp/selenium_tests/configuration.py

https://github.com/ISISScientificComputing/autoreduce

@@ -15,7 +15,7 @@ from shutil import copyfile from utils.project.structure import get_project_root -CONFIG_PATH = Path(get_project_root(), "Webapp/autoreduce_webapp/selenium_tests/config.json") +CONFIG_PATH = Path(get_project_root(), "WebApp/autoreduce_webapp/selenium_tests/config.json") TEMP_CONFIG_PATH = Path(get_project_root(), "Webapp/autoreduce_webapp/selenium_tests/temp_config.json")

CONFIG_PATH = Path ( get_project_root ( ) , "Webapp/autoreduce_webapp/selenium_tests/config.json" )

CONFIG_PATH = Path ( get_project_root ( ) , "WebApp/autoreduce_webapp/selenium_tests/config.json" )

CHANGE_STRING_LITERAL

[["Update", ["string:\"Webapp/autoreduce_webapp/selenium_tests/config.json\"", 3, 40, 3, 93], "\"WebApp/autoreduce_webapp/selenium_tests/config.json\""]]

ISISScientificComputing/autoreduce@4290c25d70f13b92c35a7cc2c520d1ed6e6204bc

autoreduce

3863ffe9e258f4dc032f8cd8fafb05f2452e7ccf

7a8ed63621d47272aabbee9545997971eccaa7bb

WebApp/autoreduce_webapp/selenium_tests/tests/base_tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -28,7 +28,7 @@ class BaseTestCase(StaticLiveServerTestCase): Base test class that provides setup and teardown of driver aswell as screenshotting capability on failed tests """ - fixtures = ["super_user_fixture"] + fixtures = ["super_user_fixture", "status_fixture"] def setUp(self) -> None: """

fixtures = [ "super_user_fixture" ]

fixtures = [ "super_user_fixture" , "status_fixture" ]

ADD_ELEMENTS_TO_ITERABLE

[["Insert", ["list", 3, 16, 3, 38], [",:,", "T"], 2], ["Insert", ["list", 3, 16, 3, 38], ["string:\"status_fixture\"", "T"], 3]]

ISISScientificComputing/autoreduce@3863ffe9e258f4dc032f8cd8fafb05f2452e7ccf

autoreduce

4ac4434e1185849860f54340d2529d13699cf807

3d15da9e7816fe3857768010444fd23527abe1d0

WebApp/autoreduce_webapp/selenium_tests/tests/base_tests.py

https://github.com/ISISScientificComputing/autoreduce

@@ -44,7 +44,7 @@ class BaseTestCase(StaticLiveServerTestCase): if self._is_test_failure(): self._screenshot_driver() self.driver.quit() - setattr("http://localhost:0000") + set_url("http://localhost:0000") def _screenshot_driver(self): now = datetime.datetime.now() screenshot_name = f"{self._testMethodName}-{now.strftime('%Y-%m-%d_%H-%M-%S')}.png"

setattr ( "http://localhost:0000" )

set_url ( "http://localhost:0000" )

WRONG_FUNCTION_NAME

[["Update", ["identifier:setattr", 3, 9, 3, 16], "set_url"]]

ISISScientificComputing/autoreduce@4ac4434e1185849860f54340d2529d13699cf807

autoreduce

d8513335423c39e797b2768f355dacb3bc5f2431

9dc1c526a04866b182060e6360e0736a3c9d0021

autoreduce_qp/manage.py

https://github.com/ISISScientificComputing/autoreduce

@@ -6,7 +6,7 @@ import sys def main(): """Run administrative tasks.""" - os.environ.setdefault('DJANGO_SETTINGS_MODULE', 'autoreduce_qp.settings') + os.environ.setdefault('DJANGO_SETTINGS_MODULE', 'autoreduce_django.settings') try: from django.core.management import execute_from_command_line except ImportError as exc:

os . environ . setdefault ( 'DJANGO_SETTINGS_MODULE' , 'autoreduce_qp.settings' )

os . environ . setdefault ( 'DJANGO_SETTINGS_MODULE' , 'autoreduce_django.settings' )

CHANGE_STRING_LITERAL

[["Update", ["string:'autoreduce_qp.settings'", 3, 53, 3, 77], "'autoreduce_django.settings'"]]

ISISScientificComputing/autoreduce@d8513335423c39e797b2768f355dacb3bc5f2431

autoreduce

af0d2dfb5b531d363c9a5256a763c0783796344b

2a2c5a555aaefbf2448d381a33c62dfc1c3768c2

setup.py

https://github.com/ISISScientificComputing/autoreduce

@@ -13,7 +13,7 @@ setup(name="autoreduce_qp", author="ISIS Autoreduction Team", url="https://github.com/ISISScientificComputing/autoreduce/", install_requires=[ - "autoreduce_utils==0.1.3", "autoreduce_db==0.1.4", "autoreduce_scripts==22.0.0.dev1", "Django==3.2.2", + "autoreduce_utils==0.1.3", "autoreduce_db==0.1.4", "autoreduce_scripts==22.0.0.dev9", "Django==3.2.2", "fire==0.4.0", "plotly==4.14.3", "stomp.py==6.1.0" ], packages=find_packages(),

install_requires = [ "autoreduce_utils==0.1.3" , "autoreduce_db==0.1.4" , "autoreduce_scripts==22.0.0.dev1" , "Django==3.2.2" , "fire==0.4.0" , "plotly==4.14.3" , "stomp.py==6.1.0" ] ,

install_requires = [ "autoreduce_utils==0.1.3" , "autoreduce_db==0.1.4" , "autoreduce_scripts==22.0.0.dev9" , "Django==3.2.2" , "fire==0.4.0" , "plotly==4.14.3" , "stomp.py==6.1.0" ] ,

CHANGE_STRING_LITERAL

[["Update", ["string:\"autoreduce_scripts==22.0.0.dev1\"", 3, 62, 3, 95], "\"autoreduce_scripts==22.0.0.dev9\""]]

ISISScientificComputing/autoreduce@af0d2dfb5b531d363c9a5256a763c0783796344b

autoreduce

fb7eb1e75b8c6c0094fe53b68c0c7100e538bd7d

3572928fa5599ca66e3e04a484524b9f660c0e1c

autoreduce_qp/systemtests/utils/data_archive.py

https://github.com/ISISScientificComputing/autoreduce

@@ -61,7 +61,7 @@ class DataArchive: location = Path(CYCLE_DIRECTORY % (instrument, f"{year}_{cycle_num}")) - location.mkdir(parents=True) + location.mkdir(parents=True, exist_ok=True) datafile = Path(location, datafile_name) datafile.touch() return str(datafile)

location . mkdir ( parents = True )

location . mkdir ( parents = True , exist_ok = True )

SAME_FUNCTION_MORE_ARGS

[["Insert", ["argument_list", 1, 23, 1, 37], [",:,", "T"], 2], ["Insert", ["argument_list", 1, 23, 1, 37], ["keyword_argument", "N0"], 3], ["Insert", "N0", ["identifier:exist_ok", "T"], 0], ["Insert", "N0", ["=:=", "T"], 1], ["Insert", "N0", ["true:True", "T"], 2]]

ISISScientificComputing/autoreduce@fb7eb1e75b8c6c0094fe53b68c0c7100e538bd7d

autoreduce

6c562cf96b332747deb7302447462064f01322ce

f19c1120a23bf51a3d80915dbc100c8e74ab30fd

setup.py

https://github.com/ISISScientificComputing/autoreduce

@@ -14,7 +14,7 @@ setup(name="autoreduce_qp", url="https://github.com/ISISScientificComputing/autoreduce/", install_requires=[ "autoreduce_utils==22.0.0.dev3", "autoreduce_db==22.0.0.dev5", "Django==3.2.4", "fire==0.4.0", - "plotly==4.14.3", "stomp.py==6.1.0" + "plotly==5.1.0", "stomp.py==6.1.0" ], packages=find_packages(), entry_points={"console_scripts": ["autoreduce-qp-start = autoreduce_qp.queue_processor.queue_listener:main"]},

install_requires = [ "autoreduce_utils==22.0.0.dev3" , "autoreduce_db==22.0.0.dev5" , "Django==3.2.4" , "fire==0.4.0" , "plotly==4.14.3" , "stomp.py==6.1.0" ] ,

install_requires = [ "autoreduce_utils==22.0.0.dev3" , "autoreduce_db==22.0.0.dev5" , "Django==3.2.4" , "fire==0.4.0" , "plotly==5.1.0" , "stomp.py==6.1.0" ] ,

CHANGE_STRING_LITERAL

[["Update", ["string:\"plotly==4.14.3\"", 3, 11, 3, 27], "\"plotly==5.1.0\""]]

ISISScientificComputing/autoreduce@6c562cf96b332747deb7302447462064f01322ce

xbmc-addons-chinese

321d0cf15a1677acf066999796952de5a53574ed

2996ef63b0c0dcbe14a70aad46f816cf198e1255

plugin.video.sohuvideo/default.py

https://github.com/Benyjuice/xbmc-addons-chinese

@@ -205,7 +205,7 @@ def progList(name,id,page,cat,area,year,p5,p6,p11,order): dialog = xbmcgui.Dialog() ok = dialog.ok(__addonname__, '没有符合此条件的视频！') else: - matchpages = re.compile('<a href="[^"]*">(\d+)</a>', re.DOTALL).findall(match[0]) + matchpages = re.compile('<a title="\d+" href="[^"]*">(\d+)</a>', re.DOTALL).findall(match[0]) totalpages = int(matchpages[-1]) if totalpages < currpage: totalpages = currpage

else : matchpages = re . compile ( '<a href="[^"]*">(\d+)</a>' , re . DOTALL ) . findall ( match [ 0 ] )

else : matchpages = re . compile ( '<a title="\d+" href="[^"]*">(\d+)</a>' , re . DOTALL ) . findall ( match [ 0 ] )

CHANGE_STRING_LITERAL

[["Update", ["string:'<a href=\"[^\"]*\">(\\d+)</a>'", 3, 33, 3, 60], "'<a title=\"\\d+\" href=\"[^\"]*\">(\\d+)</a>'"]]

Benyjuice/xbmc-addons-chinese@321d0cf15a1677acf066999796952de5a53574ed

fix match pages error due to source html changes

mli-gluon-tutorials-zh

e27ea4a44c328a9ca42300b599d1296fdb6985b3

86cef0907c522ef69b53c42b76255795470d1f5d

sphinx_plugin.py

https://github.com/liuheng0111/mli-gluon-tutorials-zh

@@ -150,7 +150,7 @@ def _release_notebook(dst_dir): """convert .md into notebooks and make a zip file""" reader = notedown.MarkdownReader(match='strict') files = glob.glob('*/*.md') - package_files = ['environment.yml', 'mnist.py', 'utils.py', 'README.md', 'LICENSE'] + package_files = ['environment.yml', 'utils.py', 'README.md', 'LICENSE'] for fname in files: # parse if each markdown file is actually a jupyter notebook with open(fname, 'r') as fp:

package_files = [ 'environment.yml' , 'mnist.py' , 'utils.py' , 'README.md' , 'LICENSE' ]

package_files = [ 'environment.yml' , 'utils.py' , 'README.md' , 'LICENSE' ]

SINGLE_STMT

[["Move", [",:,", 3, 51, 3, 52], ["list", 3, 21, 3, 88], 5], ["Move", [",:,", 3, 63, 3, 64], ["list", 3, 21, 3, 88], 8], ["Delete", ["string:'mnist.py'", 3, 41, 3, 51]], ["Delete", [",:,", 3, 76, 3, 77]]]

liuheng0111/mli-gluon-tutorials-zh@e27ea4a44c328a9ca42300b599d1296fdb6985b3

fix

mli-gluon-tutorials-zh

ffd3955749d9e0522734e195e4f4a6857462b818

75867026492e959547201c595cba1136426bcd21

sphinx_plugin.py

https://github.com/liuheng0111/mli-gluon-tutorials-zh

@@ -196,7 +196,7 @@ def release_notebook(app, exception): def generate_htaccess(app, exception): print('=== Generate .htaccess file') with open(app.builder.outdir + '/.htaccess', 'w') as f: - f.write('ErrorDocument 404 http://zh.gluon.ai/404.html\n') + f.write('ErrorDocument 404 https://zh.gluon.ai/404.html\n') for old, new in renamed_files + converted_files: f.write('Redirect /%s /%s\n'%( _replace_ext(old, 'html'), _replace_ext(new, 'html')

f . write ( 'ErrorDocument 404 http://zh.gluon.ai/404.html\n' )

f . write ( 'ErrorDocument 404 https://zh.gluon.ai/404.html\n' )

CHANGE_STRING_LITERAL

[["Update", ["string:'ErrorDocument 404 http://zh.gluon.ai/404.html\\n'", 3, 17, 3, 66], "'ErrorDocument 404 https://zh.gluon.ai/404.html\\n'"]]

liuheng0111/mli-gluon-tutorials-zh@ffd3955749d9e0522734e195e4f4a6857462b818

fix https 404 warning

autoreduce

05e348c1198f1913fee6dd1e32d820684056c2f4

60812c3c81618c836ceeb9f1582cb6944d2a972b

queue_processors/queue_processor/tests/test_instrument_variable_utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -358,7 +358,7 @@ class TestInstrumentVariableUtils(unittest.TestCase): var = new_variables_again[0].variable assert var.name == "standard_var1" - assert var.value == "123" + assert var.value == 123 assert var.type == "number" assert var.help_text == "CHANGED HELP FOR VARIABLE"

assert var . value == "123"

assert var . value == 123

CHANGE_CONSTANT_TYPE

[["Insert", ["comparison_operator", 3, 16, 3, 34], ["integer:123", "T"], 2], ["Delete", ["string:\"123\"", 3, 29, 3, 34]]]

ISISScientificComputing/autoreduce@05e348c1198f1913fee6dd1e32d820684056c2f4

autoreduce

dd1a074cfd60a70f35c19bc7e08f7f7886508141

238398c2eea0fe1531e1893e61c4a857d0ff0693

queue_processors/queue_processor/tests/test_handle_message.py

https://github.com/ISISScientificComputing/autoreduce

@@ -75,7 +75,7 @@ class TestHandleMessage(TestCase): "instrument": self.instrument_name # Autoreduction Mock Instrument }) with patch("logging.getLogger") as patched_logger: - self.handler = HandleMessage(self.mocked_client) + self.handler = HandleMessage() self.handler.connect() self.mocked_logger = patched_logger.return_value

self . handler = HandleMessage ( self . mocked_client )

self . handler = HandleMessage ( )

SAME_FUNCTION_LESS_ARGS

[["Delete", ["identifier:self", 3, 42, 3, 46]], ["Delete", [".:.", 3, 46, 3, 47]], ["Delete", ["identifier:mocked_client", 3, 47, 3, 60]], ["Delete", ["attribute", 3, 42, 3, 60]]]

ISISScientificComputing/autoreduce@dd1a074cfd60a70f35c19bc7e08f7f7886508141

autoreduce

7bb5bdb37ad312d5322e7dca2e96570bf80bf22b

a42b9c06f6eada53c1c698e93ffd4dd7360b52fe

WebApp/autoreduce_webapp/reduction_variables/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -352,7 +352,7 @@ def run_confirmation(request, instrument): # Check old run exists if most_recent_previous_run is None: - context_dictionary['error'] = "Run number " + str(run_number) + " doesn't exist." + context_dictionary['error'] = "Run number " + str(run_number) + " hasn't been ran by autoreduction yet." # Check it is not currently queued queued_runs = matching_previous_runs_queryset.filter(status=queued_status).first()

context_dictionary [ 'error' ] = "Run number " + str ( run_number ) + " doesn't exist."

context_dictionary [ 'error' ] = "Run number " + str ( run_number ) + " hasn't been ran by autoreduction yet."

CHANGE_BINARY_OPERAND

[["Update", ["string:\" doesn't exist.\"", 3, 77, 3, 94], "\" hasn't been ran by autoreduction yet.\""]]

ISISScientificComputing/autoreduce@7bb5bdb37ad312d5322e7dca2e96570bf80bf22b

autoreduce

d8b0f7f3c33a9dcdc0f9e0ba6ab61198f820a3f2

56fb22540ffeeaaaebeb47a01fbde4101ed5508e

QueueProcessors/QueueProcessor/queue_processor.py

https://github.com/ISISScientificComputing/autoreduce

@@ -141,7 +141,7 @@ class Listener(object): # Search for the experiment, if it doesn't exist then add it experiment = session.query(Experiment).filter_by(reference_number=rb_number).first() - if experiment is None and rb_number: + if experiment is None: new_exp = Experiment(reference_number=rb_number) session.add(new_exp) session.commit()

if experiment is None and rb_number : new_exp = Experiment ( reference_number = rb_number ) session . add ( new_exp ) session . commit ( )

if experiment is None : new_exp = Experiment ( reference_number = rb_number ) session . add ( new_exp ) session . commit ( )

SINGLE_STMT

[["Move", ["if_statement", 3, 9, 6, 29], ["comparison_operator", 3, 12, 3, 30], 1], ["Delete", ["and:and", 3, 31, 3, 34]], ["Delete", ["identifier:rb_number", 3, 35, 3, 44]], ["Delete", ["boolean_operator", 3, 12, 3, 44]]]

ISISScientificComputing/autoreduce@d8b0f7f3c33a9dcdc0f9e0ba6ab61198f820a3f2

autoreduce

97e7a4f41c1b4d186feedbd55b0ed03602f0c248

f8b652258e996a7ad22abd0046a578a8a9387b53

scripts/mysql_dump/reset_database_post_cycle.py

https://github.com/ISISScientificComputing/autoreduce

@@ -139,7 +139,7 @@ def main(): choice = raw_input('\'Backup\' or \'Wipe\': ') while choice.lower() != 'backup' and choice.lower() != 'wipe': choice = raw_input('Invalid option - \'Backup\' or \'Wipe\':') - choice.lower() + choice = choice.lower() cycle = raw_input('Current cycle name: ') user = raw_input('Database user name: ') password = getpass.getpass('Database password (leave blank if none): ')

choice . lower ( )

choice = choice . lower ( )

SINGLE_STMT

[["Insert", ["expression_statement", 3, 5, 3, 19], ["assignment", "N0"], 0], ["Insert", "N0", ["identifier:choice", "T"], 0], ["Insert", "N0", ["=:=", "T"], 1], ["Move", "N0", ["call", 3, 5, 3, 19], 2]]

ISISScientificComputing/autoreduce@97e7a4f41c1b4d186feedbd55b0ed03602f0c248

autoreduce

ba8bd72e397246e5d33d95d7ae9ca43f219c82b0

cbf0f2343cc1ffb3e81529f71ff1b990e2a6241c

QueueProcessors/QueueProcessor/queueproc_utils/messaging_utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -37,7 +37,7 @@ class MessagingUtils(object): def _make_pending_msg(reduction_run): """ Creates a dict message from the given run, ready to be sent to ReductionPending. """ # Deferred import to avoid circular dependencies - from ..utils.reduction_run_utils import ReductionRunUtils + from ..queueproc_utils.reduction_run_utils import ReductionRunUtils script, arguments = ReductionRunUtils().get_script_and_arguments(reduction_run)

from . . utils . reduction_run_utils import ReductionRunUtils

from . . queueproc_utils . reduction_run_utils import ReductionRunUtils

CHANGE_IDENTIFIER_USED

[["Update", ["identifier:utils", 3, 16, 3, 21], "queueproc_utils"]]

ISISScientificComputing/autoreduce@ba8bd72e397246e5d33d95d7ae9ca43f219c82b0

autoreduce

3fe99eccae85b948ef86a3650c2ae56e6f55133c

65b9e1aef1679f2706222d7acfaccff6d270373f

QueueProcessors/AutoreductionProcessor/test_settings.py

https://github.com/ISISScientificComputing/autoreduce

@@ -34,7 +34,7 @@ MISC = { "script_timeout": 3600, # The max time to wait for a user script to finish running (seconds) "mantid_path": "/opt/Mantid/bin", "scripts_directory": append_path(get_project_root(), ['data-archive', 'NDX%s', 'user', 'scripts', 'autoreduction']), - "post_process_directory": append_path(os.path.dirname(os.path.realpath(__file__)), "post_process_admin.py"), + "post_process_directory": append_path(os.path.dirname(os.path.realpath(__file__)), ["post_process_admin.py"]), "ceph_directory": append_path(get_project_root(), ['reduced-data', '%s', 'RB%s', 'autoreduced', '%s']), "temp_root_directory": "/autoreducetmp", "excitation_instruments": ["LET", "MARI", "MAPS", "MERLIN", "WISH", "GEM"]

"post_process_directory" : append_path ( os . path . dirname ( os . path . realpath ( __file__ ) ) , "post_process_admin.py" ) ,

"post_process_directory" : append_path ( os . path . dirname ( os . path . realpath ( __file__ ) ) , [ "post_process_admin.py" ] ) ,

SINGLE_STMT

[["Insert", ["argument_list", 3, 42, 3, 112], ["list", "N0"], 3], ["Insert", "N0", ["[:[", "T"], 0], ["Move", "N0", ["string:\"post_process_admin.py\"", 3, 88, 3, 111], 1], ["Insert", "N0", ["]:]", "T"], 2]]

ISISScientificComputing/autoreduce@3fe99eccae85b948ef86a3650c2ae56e6f55133c

autoreduce

d4d0bd30dd519f43a6c3fdc9cd76ad26b6e935a7

8eedf41f1cd8cfebdc1d924269392fdb62482d0c

WebApp/autoreduce_webapp/reduction_viewer/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -431,7 +431,7 @@ def instrument_summary(request, instrument=None): experiments_and_runs[experiment] = associated_runs context_dictionary['experiments'] = experiments_and_runs else: - max_items_per_page = request.GET.get('pagination', 50) + max_items_per_page = request.GET.get('pagination', 10) custom_paginator = CustomPaginator(page_type=sort_by, query_set=runs, items_per_page=max_items_per_page,

else : max_items_per_page = request . GET . get ( 'pagination' , 50 )

else : max_items_per_page = request . GET . get ( 'pagination' , 10 )

CHANGE_NUMERIC_LITERAL

[["Update", ["integer:50", 3, 64, 3, 66], "10"]]

ISISScientificComputing/autoreduce@d4d0bd30dd519f43a6c3fdc9cd76ad26b6e935a7

awx

b51a867b5f234731f5e436938eda31f8d08ae640

05613c1bea4825c2c80660647cdff2cc2c44752b

awx/main/management/commands/inventory_import.py

https://github.com/gconsidine/awx

@@ -27,7 +27,7 @@ from django.contrib.auth.models import User # AWX from awx.main.models import * from awx.main.signals import ignore_inventory_computed_fields, disable_activity_stream -from awx.main.licenses import LicenseReader +from awx.main.task_engine import TaskSerializer as LicenseReader logger = logging.getLogger('awx.main.commands.inventory_import')

from awx . main . licenses import LicenseReader

from awx . main . task_engine import TaskSerializer as LicenseReader

SINGLE_STMT

[["Insert", ["import_from_statement", 3, 1, 3, 44], ["aliased_import", "N0"], 3], ["Update", ["identifier:licenses", 3, 15, 3, 23], "task_engine"], ["Move", "N0", ["dotted_name", 3, 31, 3, 44], 0], ["Insert", "N0", ["as:as", "T"], 1], ["Move", "N0", ["identifier:LicenseReader", 3, 31, 3, 44], 2], ["Insert", ["dotted_name", 3, 31, 3, 44], ["identifier:TaskSerializer", "T"], 0]]

gconsidine/awx@b51a867b5f234731f5e436938eda31f8d08ae640

More fixes for the license obfuscation

awx

3086ec4930717252fcb5369e78dbab1b835eb825

b14aa0b55dd0768e0abb07e0f2e2338578dd3f8a

awx/main/models/inventory.py

https://github.com/gconsidine/awx

@@ -227,7 +227,7 @@ class Inventory(CommonModel): root_group_pks = set(self.root_groups.values_list('pk', flat=True)) group_depths = {} # pk: max_depth def update_group_depths(group_pk, current_depth=0): - max_depth = group_depths.get(group_pk, 0) + max_depth = group_depths.get(group_pk, -1) if current_depth > max_depth: group_depths[group_pk] = current_depth for child_pk in group_children_map.get(group_pk, set()):

max_depth = group_depths . get ( group_pk , 0 )

max_depth = group_depths . get ( group_pk , - 1 )

SINGLE_STMT

[["Insert", ["argument_list", 3, 41, 3, 54], ["unary_operator", "N0"], 3], ["Insert", "N0", ["-:-", "T"], 0], ["Insert", "N0", ["integer:1", "T"], 1], ["Delete", ["integer:0", 3, 52, 3, 53]]]

gconsidine/awx@3086ec4930717252fcb5369e78dbab1b835eb825

AC-1235 Fix for RunJobTest failures.

awx

fe29db1a466b28564a32e505f052d8bf8ab01d26

71d256583d28d9995dfa5ab5af46a91de86aa9da

awx/main/models/inventory.py

https://github.com/gconsidine/awx

@@ -200,7 +200,7 @@ class Inventory(CommonModel): # Find all hosts that need the has_inventory_sources flag cleared. hosts_to_clear = hosts_qs.filter(has_inventory_sources=True).exclude(pk__in=hosts_with_cloud_inventory) for host_pk in hosts_to_clear.values_list('pk', flat=True): - host_updates = hosts_to_updates.setdefault(host_pk, {}) + host_updates = hosts_to_update.setdefault(host_pk, {}) host_updates['has_inventory_sources'] = False # Now apply updates to hosts where needed (in batches). all_update_pks = hosts_to_update.keys()

host_updates = hosts_to_updates . setdefault ( host_pk , { } )

host_updates = hosts_to_update . setdefault ( host_pk , { } )

SAME_FUNCTION_WRONG_CALLER

[["Update", ["identifier:hosts_to_updates", 3, 28, 3, 44], "hosts_to_update"]]

gconsidine/awx@fe29db1a466b28564a32e505f052d8bf8ab01d26

Fix small plurality issue when recalculating host fields

awx

718e9916f031d3435c4b23b79a3dcb4aeab15da3

6773fd19d77f0ebc8859fdb651a0ea33defdf605

awx/main/tests/inventory.py

https://github.com/gconsidine/awx

@@ -573,7 +573,7 @@ class InventoryTest(BaseTest): # access url1 = reverse('api:group_hosts_list', args=(groups[0].pk,)) alt_group_hosts = reverse('api:group_hosts_list', args=(groups[1].pk,)) - other_alt_group_hosts = reverse('api:group_hosts_list', args(groups[2].pk,)) + other_alt_group_hosts = reverse('api:group_hosts_list', args=(groups[2].pk,)) data = self.get(url1, expect=200, auth=self.get_normal_credentials()) self.assertEquals(data['count'], 2)

other_alt_group_hosts = reverse ( 'api:group_hosts_list' , args ( groups [ 2 ] . pk , ) )

other_alt_group_hosts = reverse ( 'api:group_hosts_list' , args = ( groups [ 2 ] . pk , ) )

SINGLE_STMT

[["Insert", ["argument_list", 3, 40, 3, 85], ["keyword_argument", "N0"], 3], ["Move", "N0", ["identifier:args", 3, 65, 3, 69], 0], ["Insert", "N0", ["=:=", "T"], 1], ["Insert", "N0", ["tuple", "N1"], 2], ["Insert", "N1", ["(:(", "T"], 0], ["Move", "N1", ["attribute", 3, 70, 3, 82], 1], ["Move", "N1", [",:,", 3, 82, 3, 83], 2], ["Move", "N1", ["):)", 3, 83, 3, 84], 3], ["Delete", ["(:(", 3, 40, 3, 41]]]

gconsidine/awx@718e9916f031d3435c4b23b79a3dcb4aeab15da3

Fix a bug in the mainline inventory test

autoreduce

53d89e5f1188b96ae1ab8122090a7d2e48c57343

8ea5e7691498bf899692ab0394f7f2f487bbdfc2

queue_processors/autoreduction_processor/post_process_admin.py

https://github.com/ISISScientificComputing/autoreduce

@@ -508,7 +508,7 @@ def main(): post_proc.reduce() except ValueError as exp: - message.error = str(exp) # Note: I believe this should be .message + message.message = str(exp) # Note: I believe this should be .message logger.info("Message data error: %s", message.serialize(limit_reduction_script=True)) raise

except ValueError as exp : message . error = str ( exp )

except ValueError as exp : message . message = str ( exp )

CHANGE_ATTRIBUTE_USED

[["Update", ["identifier:error", 3, 21, 3, 26], "message"]]

ISISScientificComputing/autoreduce@53d89e5f1188b96ae1ab8122090a7d2e48c57343

autoreduce

0ab75421bc01ef369594d988a64962dbfd322cd3

da67e68679622169b4e5fad99cd906a628153012

queue_processors/autoreduction_processor/post_process_admin.py

https://github.com/ISISScientificComputing/autoreduce

@@ -508,7 +508,7 @@ def main(): post_proc.reduce() except ValueError as exp: - message.error = str(exp) # Note: I believe this should be .message + message.message = str(exp) # Note: I believe this should be .message logger.info("Message data error: %s", message.serialize(limit_reduction_script=True)) raise

except ValueError as exp : message . error = str ( exp )

except ValueError as exp : message . message = str ( exp )

CHANGE_ATTRIBUTE_USED

[["Update", ["identifier:error", 3, 21, 3, 26], "message"]]

ISISScientificComputing/autoreduce@0ab75421bc01ef369594d988a64962dbfd322cd3

autoreduce

fea540013d95c19d4bfd941a371735cd2a13277c

dda44b589944a9fcc4c4a7211e1c6b4bd99b028c

queue_processors/queue_processor/queueproc_utils/instrument_variable_utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -119,7 +119,7 @@ class InstrumentVariablesUtils: model = db.start_database().variable_model applicable_variables = model.InstrumentVariable.objects \ .filter(instrument_id=instrument.id) \ - .order('-start_run') + .order_by('-start_run') variable_run_number = applicable_variables[0].start_run # Now use the InstrumentJoin class (which is a join of the InstrumentVariable and Variable

applicable_variables = model . InstrumentVariable . objects . filter ( instrument_id = instrument . id ) . order ( '-start_run' )

applicable_variables = model . InstrumentVariable . objects . filter ( instrument_id = instrument . id ) . order_by ( '-start_run' )

WRONG_FUNCTION_NAME

[["Update", ["identifier:order", 3, 14, 3, 19], "order_by"]]

ISISScientificComputing/autoreduce@fea540013d95c19d4bfd941a371735cd2a13277c

coinbase-gdax-python

dd6e6f94411dae2dd466f33894bcc2125c3907ec

a0fc2b9998cb1b9f7e4e5c33161a8a9e12b1a4de

GDAX/AuthenticatedClient.py

https://github.com/inkblot/coinbase-gdax-python

@@ -6,7 +6,7 @@ import hmac, hashlib, time, requests, base64 from requests.auth import AuthBase -from PublicClient import PublicClient +from GDAX.PublicClient import PublicClient class AuthenticatedClient(PublicClient):

from PublicClient import PublicClient

from GDAX . PublicClient import PublicClient

SINGLE_STMT

[["Insert", ["dotted_name", 3, 6, 3, 18], ["identifier:GDAX", "T"], 0], ["Insert", ["dotted_name", 3, 6, 3, 18], [".:.", "T"], 1]]

inkblot/coinbase-gdax-python@dd6e6f94411dae2dd466f33894bcc2125c3907ec

fixed relative import for Python 3 compatibility

apsconnect-cli

6585e3c32bba972d0fd633346f552499ab79a630

35c1d2894c2d001daf76fe0005c97a02a928c20f

setup.py

https://github.com/themaxbelov/apsconnect-cli

@@ -14,7 +14,7 @@ setup( version='1.7.15', keywords='aps apsconnect connector automation', extras_require={ - ':python_version<="2.7"': ['backports.tempfile==1.0']} + ':python_version<="2.7"': ['backports.tempfile==1.0']}, packages=['apsconnectcli'], description='A command line tool for APS connector installation on Odin Automation in ' 'the relaxed way.',

extras_require = { ':python_version<="2.7"' : [ 'backports.tempfile==1.0' ] }

extras_require = { ':python_version<="2.7"' : [ 'backports.tempfile==1.0' ] } ,

SINGLE_STMT

[["Insert", ["assignment", 2, 5, 3, 63], ["expression_list", "N0"], 2], ["Move", "N0", ["dictionary", 2, 20, 3, 63], 0], ["Insert", "N0", [",:,", "T"], 1]]

themaxbelov/apsconnect-cli@6585e3c32bba972d0fd633346f552499ab79a630

typo fix

apsconnect-cli

862235a5a0b0912e715481b5ab53d0b5907d67b1

9807266880eda653c6054ce7394e5e0cdfa1f72d

apsconnectcli/apsconnect.py

https://github.com/themaxbelov/apsconnect-cli

@@ -607,7 +607,7 @@ def _get_aps_url(aps_host, aps_port, use_tls_aps): def _get_hub_version(hub): r = hub.statistics.getStatisticsReport(reports=[{'name': 'report-for-cep', 'value': ''}]) _osaapi_raise_for_status(r) - tree = xml_et.fromstring(r['result'][0]['value']) + tree = xml_et.fromstring(r['result'][0]['value'].encode('utf-8')) return tree.find('ClientVersion').text

tree = xml_et . fromstring ( r [ 'result' ] [ 0 ] [ 'value' ] )

tree = xml_et . fromstring ( r [ 'result' ] [ 0 ] [ 'value' ] . encode ( 'utf-8' ) )

ADD_METHOD_CALL

[["Insert", ["argument_list", 3, 29, 3, 54], ["call", "N0"], 1], ["Insert", ["argument_list", 3, 29, 3, 54], ["):)", "T"], 2], ["Insert", "N0", ["attribute", "N1"], 0], ["Insert", "N0", ["argument_list", "N2"], 1], ["Move", "N1", ["subscript", 3, 30, 3, 53], 0], ["Insert", "N1", [".:.", "T"], 1], ["Insert", "N1", ["identifier:encode", "T"], 2], ["Insert", "N2", ["(:(", "T"], 0], ["Insert", "N2", ["string:'utf-8'", "T"], 1], ["Move", "N2", ["):)", 3, 53, 3, 54], 2]]

themaxbelov/apsconnect-cli@862235a5a0b0912e715481b5ab53d0b5907d67b1

Fix unicode for init-hub command on python 2.7

apsconnect-cli

ac9032c254b8386815b3d05a9af09ac636ae955f

399d580fb17053caa438335e3c9fa68231ee857f

setup.py

https://github.com/themaxbelov/apsconnect-cli

@@ -11,7 +11,7 @@ install_reqs = parse_requirements(os.path.join(os.path.dirname(os.path.abspath(_ here = abspath(dirname(__file__)) -with open(join(here, 'VERSION'), encoding='utf-8') as f: +with open(join(here, 'VERSION')) as f: VERSION = f.read() setup(

with open ( join ( here , 'VERSION' ) , encoding = 'utf-8' ) as f : VERSION = f . read ( )

with open ( join ( here , 'VERSION' ) ) as f : VERSION = f . read ( )

SAME_FUNCTION_LESS_ARGS

[["Delete", [",:,", 3, 32, 3, 33]], ["Delete", ["identifier:encoding", 3, 34, 3, 42]], ["Delete", ["=:=", 3, 42, 3, 43]], ["Delete", ["string:'utf-8'", 3, 43, 3, 50]], ["Delete", ["keyword_argument", 3, 34, 3, 50]]]

themaxbelov/apsconnect-cli@ac9032c254b8386815b3d05a9af09ac636ae955f

Fix open parameters

apsconnect-cli

7f81185a70e9f7ac5c0e0be27ec6d79cfefe8cdb

d0c48b1b2f549ba377bd4b4643bba59569e363bf

apsconnectcli/apsconnect.py

https://github.com/themaxbelov/apsconnect-cli

@@ -297,7 +297,7 @@ class APSConnectUtil: print("[Success]") def install_frontend(self, source, oauth_key, oauth_secret, backend_url, settings_file=None, - network='public', hub_id=None): + network='proxy', hub_id=None): """ Install connector-frontend in Odin Automation Hub, --source can be http(s):// or filepath"""

def install_frontend ( self , source , oauth_key , oauth_secret , backend_url , settings_file = None , network = 'public' , hub_id = None ) : """ Install connector-frontend in Odin Automation Hub, --source can be http(s):// or filepath"""

def install_frontend ( self , source , oauth_key , oauth_secret , backend_url , settings_file = None , network = 'proxy' , hub_id = None ) : """ Install connector-frontend in Odin Automation Hub, --source can be http(s):// or filepath"""

CHANGE_STRING_LITERAL

[["Update", ["string:'public'", 3, 34, 3, 42], "'proxy'"]]

themaxbelov/apsconnect-cli@7f81185a70e9f7ac5c0e0be27ec6d79cfefe8cdb

Use proxy network by default

eclean-kernel

93fffd7dc95bb93916629d1c56df8c24adb01a4a

70af8b97fd7c90a6b881f2ba311abd79dd2ddc1a

ecleankernel/kernel.py

https://github.com/mgorny/eclean-kernel

@@ -86,7 +86,7 @@ class Kernel(object): def check_writable(self): for path in (self.vmlinuz, self.systemmap, self.config, self.modules, self.build): - if not os.access(path, os.W_OK): + if path is not None and not os.access(path, os.W_OK): raise OSError('%s not writable, refusing to proceed' % path) def __repr__(self):

if not os . access ( path , os . W_OK ) : raise OSError ( '%s not writable, refusing to proceed' % path )

if path is not None and not os . access ( path , os . W_OK ) : raise OSError ( '%s not writable, refusing to proceed' % path )

MORE_SPECIFIC_IF

[["Insert", ["if_statement", 3, 4, 4, 65], ["boolean_operator", "N0"], 1], ["Insert", "N0", ["comparison_operator", "N1"], 0], ["Insert", "N0", ["and:and", "T"], 1], ["Move", "N0", ["not_operator", 3, 7, 3, 35], 2], ["Insert", "N1", ["identifier:path", "T"], 0], ["Insert", "N1", ["is:is", "T"], 1], ["Insert", "N1", ["not:not", "T"], 2], ["Insert", "N1", ["none:None", "T"], 3]]

mgorny/eclean-kernel@93fffd7dc95bb93916629d1c56df8c24adb01a4a

eclean-kernel

5c4c49a1996b87518846b49e8fd971892f749b69

8fe312cf86248fd5e700fb4877021e8bd003d2fd

ecleankernel/kernel.py

https://github.com/mgorny/eclean-kernel

@@ -10,7 +10,7 @@ from glob import glob class PathRef(str): def __init__(self, path): - str.__init__(self, path) + str.__init__(self) self._refs = 0 def ref(self):

str . __init__ ( self , path )

str . __init__ ( self )

SAME_FUNCTION_LESS_ARGS

[["Delete", [",:,", 3, 20, 3, 21]], ["Delete", ["identifier:path", 3, 22, 3, 26]]]

mgorny/eclean-kernel@5c4c49a1996b87518846b49e8fd971892f749b69

eclean-kernel

72a58fe23c5629413a6d96dadbdccdeab801ced3

e737832fd6bebbae02385b83f7dc86536bad688a

ecleankernel/kernel.py

https://github.com/mgorny/eclean-kernel

@@ -144,7 +144,7 @@ class Kernel(object): buf = f.read(0x10) if buf[2:6] != b'HdrS': raise NotImplementedError('Invalid magic for kernel file %s (!= HdrS)' - % path) + % vmlinuz) offset = struct.unpack_from('H', buf, 0x0e)[0] f.seek(offset - 0x10, 1) buf = f.read(0x100) # XXX

raise NotImplementedError ( 'Invalid magic for kernel file %s (!= HdrS)' % path )

raise NotImplementedError ( 'Invalid magic for kernel file %s (!= HdrS)' % vmlinuz )

CHANGE_BINARY_OPERAND

[["Update", ["identifier:path", 3, 8, 3, 12], "vmlinuz"]]

mgorny/eclean-kernel@72a58fe23c5629413a6d96dadbdccdeab801ced3

autoreduce

4b5c75e60642d1db6f542e3a251ebd3e11b7ef7d

75d2367377c4171dc4cdfb63f49644b490708a74

autoreduce_webapp/reduction_viewer/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -251,7 +251,7 @@ def experiment_summary(request, reference_number): context_dictionary = {} #Check the users permissions - if not request.user.is_superuser and reference_number not in request.session['experiments'] and experiment_details.instrument not in request.session['owned_instruments']: + if not request.user.is_superuser and reference_number not in request.session['experiments'] and experiment_details['instrument'] not in request.session['owned_instruments']: raise PermissionDenied() return context_dictionary

if not request . user . is_superuser and reference_number not in request . session [ 'experiments' ] and experiment_details . instrument not in request . session [ 'owned_instruments' ] : raise PermissionDenied ( )

if not request . user . is_superuser and reference_number not in request . session [ 'experiments' ] and experiment_details [ 'instrument' ] not in request . session [ 'owned_instruments' ] : raise PermissionDenied ( )

SINGLE_STMT

[["Insert", ["comparison_operator", 3, 101, 3, 174], ["subscript", "N0"], 0], ["Move", "N0", ["identifier:experiment_details", 3, 101, 3, 119], 0], ["Insert", "N0", ["[:[", "T"], 1], ["Insert", "N0", ["string:'instrument'", "T"], 2], ["Insert", "N0", ["]:]", "T"], 3], ["Delete", [".:.", 3, 119, 3, 120]], ["Delete", ["identifier:instrument", 3, 120, 3, 130]], ["Delete", ["attribute", 3, 101, 3, 130]]]

ISISScientificComputing/autoreduce@4b5c75e60642d1db6f542e3a251ebd3e11b7ef7d

autoreduce

330eb3368dff6b38249dfbbdc8a283d3d0798cff

74ba7b6acdb46ff29d9f32a688569f1c9b21ca00

autoreduce_webapp/autoreduce_webapp/queue_processor.py

https://github.com/ISISScientificComputing/autoreduce

@@ -76,7 +76,7 @@ class Listener(object): if last_run is not None: highest_version = last_run.run_version else: - highest_version = 0 + highest_version = -1 experiment, experiment_created = Experiment.objects.get_or_create(reference_number=self._data_dict['rb_number'])

highest_version = 0

highest_version = - 1

SINGLE_STMT

[["Insert", ["assignment", 3, 13, 3, 32], ["unary_operator", "N0"], 2], ["Insert", "N0", ["-:-", "T"], 0], ["Insert", "N0", ["integer:1", "T"], 1], ["Delete", ["integer:0", 3, 31, 3, 32]]]

ISISScientificComputing/autoreduce@330eb3368dff6b38249dfbbdc8a283d3d0798cff

autoreduce

c663b8cc4f2ba1b17b8dfa52de13859ebd1ec659

94e1774d99291ac4c01fb4a74892350b48120b58

rpmbuild/autoreduce-mq/usr/bin/PostProcessAdmin.py

https://github.com/ISISScientificComputing/autoreduce

@@ -255,7 +255,7 @@ class PostProcessAdmin: self.delete_temp_directory(reduce_result_dir) self.client.send(self.conf['reduction_complete'] , json.dumps(self.data)) - logging.info("\nCalling: "+self.conf['reduction_complete'] + "\n" + json.dumps(self.data) + "\n") + logger.info("\nCalling: "+self.conf['reduction_complete'] + "\n" + json.dumps(self.data) + "\n") except Exception, e: self.data["message"] = "REDUCTION Error: %s " % e

logging . info ( "\nCalling: " + self . conf [ 'reduction_complete' ] + "\n" + json . dumps ( self . data ) + "\n" )

logger . info ( "\nCalling: " + self . conf [ 'reduction_complete' ] + "\n" + json . dumps ( self . data ) + "\n" )

SAME_FUNCTION_WRONG_CALLER

[["Update", ["identifier:logging", 3, 13, 3, 20], "logger"]]

ISISScientificComputing/autoreduce@c663b8cc4f2ba1b17b8dfa52de13859ebd1ec659

autoreduce

7deddb0b7ac6640e282e9feb5e4e1aeb450e77e4

2199c09d08a756b4862fb8102062f714c6e54629

autoreduce_webapp/reduction_viewer/models.py

https://github.com/ISISScientificComputing/autoreduce

@@ -42,7 +42,7 @@ class ReductionRun(models.Model): graph = SeparatedValuesField(null=True, blank=True) hidden_in_failviewer = models.BooleanField(default=False) retry_when = models.DateTimeField(null=True, blank=True) - retry_run = models.ForeignKey('self', on_delete=models.CASCADE, null=True) + retry_run = models.ForeignKey('self', on_delete=models.SET_NULL, null=True, blank=True) cancel = models.BooleanField(default=False) def __unicode__(self):

retry_run = models . ForeignKey ( 'self' , on_delete = models . CASCADE , null = True )

retry_run = models . ForeignKey ( 'self' , on_delete = models . SET_NULL , null = True , blank = True )

SINGLE_STMT

[["Insert", ["argument_list", 3, 34, 3, 79], [",:,", "T"], 6], ["Insert", ["argument_list", 3, 34, 3, 79], ["keyword_argument", "N0"], 7], ["Insert", "N0", ["identifier:blank", "T"], 0], ["Insert", "N0", ["=:=", "T"], 1], ["Insert", "N0", ["true:True", "T"], 2], ["Update", ["identifier:CASCADE", 3, 60, 3, 67], "SET_NULL"]]

ISISScientificComputing/autoreduce@7deddb0b7ac6640e282e9feb5e4e1aeb450e77e4

autoreduce

2c7787d5430021467084df7a6ffaf77ca46ff8dd

4333ee3906ad5fcfdae435a7459c76d09790163f

autoreduce_webapp/reduction_variables/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -399,7 +399,7 @@ def run_confirmation(request, instrument): for item in range_string: if '-' in item: split_range = item.split('-') - run_numbers.extend(range(int(split_range[0]), int(split_range[1]))) + run_numbers.extend(range(int(split_range[0]), int(split_range[1])+1)) # because this is a range, the end bound is exclusive! else: run_numbers.append(int(item))

run_numbers . extend ( range ( int ( split_range [ 0 ] ) , int ( split_range [ 1 ] ) ) )

run_numbers . extend ( range ( int ( split_range [ 0 ] ) , int ( split_range [ 1 ] ) + 1 ) )

SINGLE_STMT

[["Insert", ["argument_list", 3, 45, 3, 87], ["binary_operator", "N0"], 3], ["Move", "N0", ["call", 3, 67, 3, 86], 0], ["Insert", "N0", ["+:+", "T"], 1], ["Insert", "N0", ["integer:1", "T"], 2]]

ISISScientificComputing/autoreduce@2c7787d5430021467084df7a6ffaf77ca46ff8dd

autoreduce

1270eb6ff88a69907e1dbcd11351eed3a64dc34b

3b66721a9e590512f95582a45fec3d3686aabe91

autoreduce_webapp/reduction_variables/models.py

https://github.com/ISISScientificComputing/autoreduce

@@ -6,7 +6,7 @@ class Variable(models.Model): value = models.CharField(max_length=300, blank=False) type = models.CharField(max_length=50, blank=False) is_advanced = models.BooleanField(default=False) - help_text = models.CharField(max_length=300, blank=True, null=True, default='') + help_text = models.TextField(blank=True, null=True, default='') def __unicode__(self): return u'%s - %s=%s' % (self.instrument.name, self.name, self.value)

help_text = models . CharField ( max_length = 300 , blank = True , null = True , default = '' )

help_text = models . TextField ( blank = True , null = True , default = '' )

SINGLE_STMT

[["Update", ["identifier:CharField", 3, 24, 3, 33], "TextField"], ["Delete", ["identifier:max_length", 3, 34, 3, 44]], ["Delete", ["=:=", 3, 44, 3, 45]], ["Delete", ["integer:300", 3, 45, 3, 48]], ["Delete", ["keyword_argument", 3, 34, 3, 48]], ["Delete", [",:,", 3, 48, 3, 49]]]

ISISScientificComputing/autoreduce@1270eb6ff88a69907e1dbcd11351eed3a64dc34b

autoreduce

1170c440daa88a471843ace2a2898a2523ddd9b8

a6f2ad4c31838fe0985b9c4574607c7d341f18a2

autoreduce_webapp/reduction_variables/views.py

https://github.com/ISISScientificComputing/autoreduce

@@ -172,7 +172,7 @@ def instrument_variables(request, instrument, start=0, end=0, experiment_referen variables = InstrumentVariablesUtils().show_variables_for_run(instrument_name, start) if not editing or not variables: - variables = InstrumentVariablesUtils().get_default_variables(instrument.name) + variables = InstrumentVariablesUtils().show_variables_for_run(instrument.name) editing = False standard_vars = {}

variables = InstrumentVariablesUtils ( ) . get_default_variables ( instrument . name )

variables = InstrumentVariablesUtils ( ) . show_variables_for_run ( instrument . name )

WRONG_FUNCTION_NAME

[["Update", ["identifier:get_default_variables", 3, 52, 3, 73], "show_variables_for_run"]]

ISISScientificComputing/autoreduce@1170c440daa88a471843ace2a2898a2523ddd9b8

autoreduce

8e94f029f5be36f32770a9a47324f2e5def19508

07227f1c4813a9386da445586eb3a825e515cb21

autoreduce_webapp/autoreduce_webapp/icat_cache.py

https://github.com/ISISScientificComputing/autoreduce

@@ -26,7 +26,7 @@ class ICATCache(object): def __exit__(self, type, value, traceback): if self.icat is not None: - self.icat.__exit__() + self.icat.__exit__(type, value, traceback) def open_icat(self): """ Try to open an ICAT session, if we don't have one already. """

self . icat . __exit__ ( )

self . icat . __exit__ ( type , value , traceback )

SAME_FUNCTION_MORE_ARGS

[["Insert", ["argument_list", 3, 31, 3, 33], ["identifier:type", "T"], 1], ["Insert", ["argument_list", 3, 31, 3, 33], [",:,", "T"], 2], ["Insert", ["argument_list", 3, 31, 3, 33], ["identifier:value", "T"], 3], ["Insert", ["argument_list", 3, 31, 3, 33], [",:,", "T"], 4], ["Insert", ["argument_list", 3, 31, 3, 33], ["identifier:traceback", "T"], 5]]

ISISScientificComputing/autoreduce@8e94f029f5be36f32770a9a47324f2e5def19508

autoreduce

eb6a1c559c8b34ea5c58f012bd891fdb3a85a589

8e94f029f5be36f32770a9a47324f2e5def19508

autoreduce_webapp/autoreduce_webapp/icat_cache.py

https://github.com/ISISScientificComputing/autoreduce

@@ -114,7 +114,7 @@ def make_member_func(obj_type, cache_attr, list_type): # Get the attribute we want, parsing it as a list if we should. attr = getattr(new_obj, cache_attr) if list_type is not None: - attr = map(list_type, attr.split(",")) + attr = map(list_type, filter(bool, attr.split(","))) return attr return member_func

attr = map ( list_type , attr . split ( "," ) )

attr = map ( list_type , filter ( bool , attr . split ( "," ) ) )

ADD_FUNCTION_AROUND_EXPRESSION

[["Insert", ["call", 3, 35, 3, 50], ["identifier:filter", "T"], 0], ["Insert", ["call", 3, 35, 3, 50], ["argument_list", "N0"], 1], ["Insert", "N0", ["(:(", "T"], 0], ["Insert", "N0", ["identifier:bool", "T"], 1], ["Insert", "N0", [",:,", "T"], 2], ["Move", "N0", ["call", 3, 35, 3, 50], 3], ["Insert", "N0", ["):)", "T"], 4]]

ISISScientificComputing/autoreduce@eb6a1c559c8b34ea5c58f012bd891fdb3a85a589

autoreduce

d6d2771a31181d4934a2e9d72f157a812ef5c3f3

245e0857ea4f2847a8cae07d9d1a6a76302031a4

autoreduce_webapp/reduction_variables/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -171,7 +171,7 @@ class InstrumentVariablesUtils(object): self._update_variables(variables) # Create run variables from these instrument variables, and return them. - return VariableUtils().save_run_variables(self, variables, reduction_run) + return VariableUtils().save_run_variables(variables, reduction_run) def get_current_and_upcoming_variables(self, instrument_name):

return VariableUtils ( ) . save_run_variables ( self , variables , reduction_run )

return VariableUtils ( ) . save_run_variables ( variables , reduction_run )

SAME_FUNCTION_LESS_ARGS

[["Move", [",:,", 3, 55, 3, 56], ["argument_list", 3, 50, 3, 82], 3], ["Delete", ["identifier:self", 3, 51, 3, 55]], ["Delete", [",:,", 3, 66, 3, 67]]]

ISISScientificComputing/autoreduce@d6d2771a31181d4934a2e9d72f157a812ef5c3f3

autoreduce

0e3c9502aced165d2c0dcc89f4ff1da85d4448e6

d6d2771a31181d4934a2e9d72f157a812ef5c3f3

autoreduce_webapp/reduction_viewer/utils.py

https://github.com/ISISScientificComputing/autoreduce

@@ -123,7 +123,7 @@ class ReductionRunUtils(object): new_job.data_location.add(new_data_location) if not variables: # provide variables if they aren't already - InstrumentVariablesUtils.create_variables_for_run(new_job) + InstrumentVariablesUtils().create_variables_for_run(new_job) return new_job

InstrumentVariablesUtils . create_variables_for_run ( new_job )

InstrumentVariablesUtils ( ) . create_variables_for_run ( new_job )

SINGLE_STMT

[["Insert", ["attribute", 3, 17, 3, 66], ["call", "N0"], 0], ["Move", "N0", ["identifier:InstrumentVariablesUtils", 3, 17, 3, 41], 0], ["Insert", "N0", ["argument_list", "N1"], 1], ["Insert", "N1", ["(:(", "T"], 0], ["Insert", "N1", ["):)", "T"], 1]]

ISISScientificComputing/autoreduce@0e3c9502aced165d2c0dcc89f4ff1da85d4448e6