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Datasets:
mayerantoine
/
injury-narrative-coding

Tasks:
Text Classification
Languages:
English
Size:
100K<n<1M
Tags:
medical
License:
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The dataset generation failed because of a cast error
Error code:   DatasetGenerationCastError
Exception:    DatasetGenerationCastError
Message:      An error occurred while generating the dataset

All the data files must have the same columns, but at some point there are 1 missing columns ({'event'})

This happened while the csv dataset builder was generating data using

hf://datasets/mayerantoine/injury-narrative-coding/test.csv (at revision 61ac88cc557f00ba44aa78190116b185bb4b8ac7)

Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback:    Traceback (most recent call last):
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2011, in _prepare_split_single
                  writer.write_table(table)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 585, in write_table
                  pa_table = table_cast(pa_table, self._schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2302, in table_cast
                  return cast_table_to_schema(table, schema)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2256, in cast_table_to_schema
                  raise CastError(
              datasets.table.CastError: Couldn't cast
              text: string
              sex: int64
              age: int64
              -- schema metadata --
              pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 577
              to
              {'text': Value(dtype='string', id=None), 'sex': Value(dtype='int64', id=None), 'age': Value(dtype='int64', id=None), 'event': Value(dtype='int64', id=None)}
              because column names don't match
              
              During handling of the above exception, another exception occurred:
              
              Traceback (most recent call last):
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1321, in compute_config_parquet_and_info_response
                  parquet_operations = convert_to_parquet(builder)
                File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 935, in convert_to_parquet
                  builder.download_and_prepare(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1027, in download_and_prepare
                  self._download_and_prepare(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1122, in _download_and_prepare
                  self._prepare_split(split_generator, **prepare_split_kwargs)
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1882, in _prepare_split
                  for job_id, done, content in self._prepare_split_single(
                File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2013, in _prepare_split_single
                  raise DatasetGenerationCastError.from_cast_error(
              datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
              
              All the data files must have the same columns, but at some point there are 1 missing columns ({'event'})
              
              This happened while the csv dataset builder was generating data using
              
              hf://datasets/mayerantoine/injury-narrative-coding/test.csv (at revision 61ac88cc557f00ba44aa78190116b185bb4b8ac7)
              
              Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)

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text
string
sex
int64
age
int64
event
int64
57YOM WITH CONTUSION TO FACE AFTER STRIKING IT WITH A POST POUNDER WHILE SETTING A FENCE POST
1
57
62
A 45YOM FELL ON ARM WHILE WORKING HAD SLIPPED ON WATER FX WRIST
1
45
42
58YOM WITH CERVICAL STRAIN BACK PAIN S P RESTRAINED TAXI DRIVER IN LOW SPEED REAR END MVC NO LOC NO AB DEPLOYED
1
58
26
33 YOM LAC TO HAND FROM A RAZOR KNIFE
1
33
60
53YOM AT WORK IN A WAREHOUSE DOING UNSPECIFIED LIFTING AND STRAINED LO WER BACK
1
53
71
31YOM AT A CLIENTS HOME TRIMMING A TREE WITH A CHAIN SAW AND THE SAW KICKED BACK HIT LOWER ARM LACERATION TO LOWER ARM
1
31
62
54 YO MALE CUT FINGER SHARPENING A KNIFE AT WORK DX RIGHT INDEX FINGERLACERATION B
1
54
60
60 YOM STATES HE WAS WORKING IN A WOOD SHOP YESTERDAY AND FELT SOMETHING GO INTO HIS RT EAR DX FB REMOVAL RT EAR CANAL
1
60
69
36 YO M C O B L BACK PAIN SINCE FRI WORSE TODAY PT LIFTS HEAVY TRASH BAGS AT WORK DX LUMBAR STRAIN
1
36
71
41YOF SHOULDER PAIN AFTER LIFTING A PACKAGE AT WORK
2
41
71
48 YOM CELLULITIS TO LT KNEE REPORTS GOING UP AND DOWN A LADDER WHILE PAINTING GUTTERS AT WORK THE LAST 2 DAYS
1
48
73
38YOM HURT HAND HIT WITH SCREWDRIVER DX PUNNC TO HAND
1
38
62
47YOM KNEE PAIN AT WORK CROUCHED DOWN WHEN HE STOOD UP HE FELT A POP IN HIS RT KNEE C O PAIN WHEN HE STRAIGHTENS LEG
1
47
73
27 YO F WORKING AT HOSPITAL ATTEMPTING TO GET A BLOOD SUGAR ON A PATIENT WHEN SHE WAS SPLASHED IN EYE WITH BLOOD DX BLOOD EXPOSURE
2
27
55
23YOM LAC TO R ARM WHILE USING A SHEETROCK KNIFE AT WORK DX ARM LAC
1
23
62
25 YOM FX NOSE S P ASSAULT BY CLIENT AT WORK STRUCK TO FACE MULTIPLE TIMES NO LOC
1
25
11
51YOM AT WORK USING A FLOOR BUFFER AND SUSTAINED AN AMPUTATION TO TIP OF FINGER
1
51
60
40YOM FELL AT WORK FROM SCAFFOLDING DX SHOULDER DISLOCATION
1
40
43
44 YOF DX LT THUMB SPRAIN STRAIN S P DUE TO ASSISTING IN CHANGING A HEAVY INDIVIDUAL AT WORK
2
44
71
38YF REPORTS ALWAYS HEAVY LIFTING WORK NOWWITH C O SHOULDER PAIN
2
38
71
43 YO M AT 3PM YESTERDAY WAS CUTTING WIRE FOR CONSTRUCTION PROJECT CUT WIRE THE END FLEW INTO AIR CUTTING HIM OPEN DX SHOULDER LACERATION
1
43
62
21YO WHITE MALE AT WORK A GLASS BROKE L 5TH DIGIT LACERATION DX LACERATION
1
21
60
31 YOM WAS AT WORK AT A PIG FARM WAS OPENING A CRATE WITH TWO SOWS IN IT AND ONE SLAMMED HAND BETWEEN CRATE LOCK AND PIG DX HAND CONTUSION
1
31
13
27 Y O F LBP AFTER FALLING 2 1 2 FEET STANDIING ON A PALLET AT WORK
2
27
43
39YOM AT WORK FELL HITTING HEAD ON A METAL TENT DX CHI
1
39
42
A 34YOM DID HEAVY LIFTING AT WORK SHOULDER STRAIN
1
34
71
62YOM W GROIN INGUINAL PAIN REPORTS HE HAS BEEN DOING STRENOUS WORK ONHIS CONSTRUCTION JOB
1
62
99
66 YO F EMPLOYEE PRESETNS AFTER TRIPPING OVER IV TUBING IN DARK ROOM AND FALLING FORWARD INTO THE WALL C O FACE RT KNEE PAIN DX C H I TRAP SPA
2
66
42
30 YOF WAS AT WORK AND PIPE BURST AND CONTENTS SPLASHED IN HER FACE
2
30
32
45 YEAR OLD MALE PATIENT CUT ARM ON DIRTY PIECE OF ALUMINUM AT WORK DX 6 CM LACERATION TO RIGHT FOREARM
1
45
60
39 YOM DX RT ARM BRUISE DUE TO FALL FROM SCAFFOLD TODAY
1
39
43
17YOM STARTED A LANDSCAPE JOB TODAY AND DEVELOPED PAIN IN LOWER BACK DX LUMBAR STRAIN
1
17
70
55 YOM STATES FELL AT WORK INJURING WRIST DX RIGHT WRIST SPRAIN
1
55
42
30 YOF LACERATION TO LT HAND S P ACCIDENTALLY CUTTING HAND ON A KNIFE THAT WAS PROTRUDING FROM A NAPKIN AT WORK LAST NIGHT
2
30
60
50 YO M S B TAXI DRIVER IN COLLISION THIS AM C O PAIN RT NECK HIT HEAD ON BY CAR MAKING LT TURN W O AIRBAGS DX MSK PAIN
1
50
26
HUMAN BITE SCRATCH INJ S L ARM 29YOWM AT WORK WAS ATTACKED BY A CLIENT THAT BIT HIS FOREARM SCRATCHED HIM AS WELL
1
29
11
63 YOM PUSHED ON EMERGENCY BRAKE ON TRUCK AT WORK SUDDEN PAIN IN FOOT DX FOOT PAIN
1
63
71
50 YOF TRIED TO STOP STACK OF HEAVY PLATES FROM FALLING AT WORK AND HURT FINGER CONTUSION FINGER
2
50
71
37YOM HAD SLEDGE HAMMER SPLIT OFF SPLINTER WORK FB IN CHEST DX FB IN CHEST
1
37
60
43 YO F EMPLOYEE C O HEADACHE LT ELBOW LT ANKLE PAIN 1 HR AGO WALKING UP STAIRS TRIPPED FELL BACKWARDS HIT HEAD DX HEAD INJURY
2
43
42
41YOM WITH WELDER S FLASH TO EYES FROM WELDING AT WORK
1
41
52
39YOF WITH FRACTURED HAND CAUGHT IN MIXER AT WORK
2
39
64
27YOF CUT LT THUMB ON BREAD KNIFE WORK DX THUMB LAC
2
27
60
18 YOM CUTTING OPEN BOXES WITH BOX CUTTER AT WORK AND INJURED HIS FINGER DX LEFT INDEX FINGER LAC
1
18
62
46 YOF DX CONTUSION OF RT FOREARM S P ASSAULTED BY PATIENT AT NURSINGHOME JUST PTA
2
46
11
42YM WORKS IN A FACTORY C REPETITIVE LIFTING TASKS C O ELBOW PAIN LATERAL EPICONDYLITIS
1
42
71
50YOM WITH FRACTURE TO RIGHT HAND AFTER SLAMMING IN IT DOOR OF TRUCK WHILE WORKING AS TRUCKER
1
50
62
20YOM AT WORK FIRST DAY ON THE JOB AND DEVELOPED PAIN IN RIBS DX RIB PAIN
1
20
99
52YOM SUST FX TO KNEE WHEN HE SLIPPED AND FELL ON ICE WHILE AT WORK
1
52
42
53 YO MALE SLIPPED ON JUICE ON FLOOR AT WORK DX RIB FX B
1
53
42
59 YOM W BURN TO RT FOOT REPORTS WAS AT WORK TODAY AND WAS BURNED TO SITE W HOT WATER FROM A PRESSURE WASHER
1
59
53
50YOM AT A CLIENTS HOME AND FELL OFF A ROOF RIB FRFACTURES
1
50
43
30YF C O SOF WORSENING LBP BEGAN WHILE LIFTING A HEAVY PATIENT WORK MS
2
30
71
A 33YOM WAS AT WORK ON TRAIN SCREWDRIVER HIT ELEC BREAKER PT SUSTAINED ELECTRICAL BURN TO HAND
1
33
51
22 YO M C O CUT TO RT RING GOT YESTERDAY AT HIS JOB AT SUBJECT AT 8PM FROM METAL FOOD TRAY DX FINGER LAC
1
22
60
45 YOF WAS IN HAZMAT TRAINING AND FELL HITTING COCCYX DX CONTUSION
2
45
42
39 YOF CUT L MIDDLE FINGER AT WORK D X FINGER LAC
2
39
60
27YOM UPPER BACK PAIN AFTER DOING HEAVVY LIFTING ON THE FARM
1
27
71
35YOM WITH SHOULDER DISLOCATION AFTER FALLING FROM A LADDER AT WORK DX DISLOCATION
1
35
43
20YM WKS IN CONSTRUCTION WAS STAINDING ON BACK OF TRUCK WHEN THE TAILTAGE OF THE TRUCK BOUNCHED UP HITING B L SHINS LAC
1
20
62
38YM WAS SLICING FOOD WORK ACC CUT LT THUMB ON A KNIFE LAC
1
38
60
23YM SHOULDER PAIN AFTER PULLING LIFTING A BOX WORK MS
1
23
71
57YOF WORK AS HOME HEALTH NURSE C O FALL FROM FRONT OF TRAILER HOME JUST PTA HIT KNEE ON PLASTIC CRATE HI LOC DX LEFT PATELLA FRACTURE
2
57
43
36 YOM C O WHILE AT WORK HAD A ALTERCATION WITH A PERSON AT WORK WITH INJURY TO HAND DX HAND ABRASION
1
36
11
41 YOM C O LOWER BACK PAIN AFTER LIFTING A TIRE AT WORK DX LUMBAGO WITH SCIATICA
1
41
71
37YOM WAS LIFTING A BASKET AT WORK PUSHED UP ON RAILING IT GAVE WAY HYPERFLEXED HIS RT WRIST DX RT WRIST SPRAIN
1
37
71
36YOM SLIPPED ON WET FLOOR FELL AT WORK DX ACUTE CERVICAL SPINE STRAIN ACUTE BACK PX W SCIATICA ACUTE CONCUSSION
1
36
42
53 YOM WORK INJURY WITH METAL OBJECT LACERATION TO RIGHT THUMB
1
53
60
27YOM WAS BITTEN ON FACE WHILE ARRESTING SUSPECT AT WORK HUMAN BITE FACE
1
27
11
39 YOM PT PRESENTED TO ED WITH KNEE PAIN STATES THAT HE DRIVES A TRUCKAT WORK AND OVER USES KNEE DX KNEE EFFUSION
1
39
71
48YOF AT WORK 3 DAYS AGO BENT OVER TO GET SOMETHING HIT HEAD ON DISPLAY CASE HEADACHE
2
48
63
30 YOM FINGER PAIN AFTER FINGER TIP WAS CAUGHT IN A CONVERYOR BELT DX MALLET DEFORMITY OF FINGER
1
30
64
18YOM AT WORK USING CAUSTIC ACID TO CLEAN FLOORS INHALED FUMES COUGH THROAT BURNING DX CHEST BURNING FROM INHALATION INJURY ACUTE SORE THROAT
1
18
55
28 YOM METAL FELL ON FOOT AT WORK DX FOOT STRAIN
1
28
62
57 YOM DX FX OF LT DISTAL FIB TIB S P BIBEMS AFTER FALL ONTO LT ANKLEAT WORK
1
57
42
20YOM WORKS AT A GROCERY STORE WAS SHARPENING A KNIFE THAT SLIPPED AND CUT THUMB LAC TO THUMB
1
20
62
46 Y O F FIINGER AVULSION USING AN SUBJECT KNIFE AT WORK
2
46
62
65YOF FELL ONTO CONCRETE STEPS AT WORK FACIAL LACERATION
2
65
42
33YOF W BODY FLUID EXPOSURE TO FACE 2 2 URINE FROM A PATIENT S SHEET SPLASHING ONTO HER FACE
2
33
55
24YOF LIFTED A CLIENT FELT PAIN STRAIN IN LOW BACK DX LUMBAR STRAIN
2
24
71
52YOM WITH SPRAINED ANKLE FELL OFF LADDER AT WORK
1
52
43
SCALP CONT 41YOF WHILE AT WORK TIPPED OVER BACKWARD IN CHAIR AND HIT HER HEAD
2
41
42
21 YOF LT SIDED CHEST PRESSURE SOB AFTER PT STARTED WORKING AS A WAITRESS DX COSTOCHONDRITIS
2
21
78
23YOF WAS AT WORK MAKING AN ARREST AND WAS ASSAULTED KICKED IN THE LOWER ARM ABRASION TO LOWER ARM
2
23
11
LOW BACK PAIN 20YOWF C O LOW BACK PAIN SINCE YESTERDAY WHEN SHE DID HEAVY LIFTING AT WORK PUSHING BOXES UNLOADING A TRUCK
2
20
71
25YOM FELL OFF LADDER 8 9 FEET ONTO BACK AT WORK DX RIB CONTU FALL FROM LADDER
1
25
43
55YOF METAL SCRAP YARD JUMPED UP TO AVOID FLYING METAL PRESSURIZED CYLINDER FELL BACK ONTO BUTTOCKS ON CYLINDER DX CONTUSION
2
55
42
23YOF AT WORK DROPPED A PIECE OF GRANITE ONTO FOOT CONTUSION TO FOOT
2
23
62
25YM ACC STRUCK LT RING LITTLE FINGERS WHILE HAMMERING WORK LAC
1
25
62
51 Y O MALE INHALED BURNED PLASTIC FROM A FILTER FROM A LASER CUTTER AT WORK DX INHALATION INJURY
1
51
55
34YOM FRACTURED FOOT INJURED WHEN HE STEPPED WORK ON METAL PLATFORM AT WORK
1
34
60
X 59YOF WAS EXPOSED TO PROPANE LEAK AT WORK TODAY DX EXPOSURE TO GASEOUS SUBSTANCE
2
59
55
66YOM W OPEN BOOK PELVIC FX RIB FXS FACIAL LACS ANKLE LAC S P PEDESTRIAN RUN OVER BY HIS OWN VAN WAS NOT PLACED IN PARK
1
66
62
46YOF AT WORK AT NURSING HOME WHEELCHAIR RAN OVER FOOT CONTUSION TO FOOT
2
46
62
49YOF C O CHEST WALL PAIN AFTER STRETCHING AT WORK DX PAIN
2
49
73
27 YM WAS GIVING AN INJECTION AT WORK STUCK FINGER W NEEDLE DX FINGER PUNCTURE
1
27
55
31YF WKR IN ICECREAM SHOP WAS FESTIVAL SCOOPING ICECREAMX5 6HRS WHENLATER NOTICED WRIST PAIN TENDONITIS
2
31
71
25 YOM DX CONTUSION OF SCALP AND NECK S P PT GOT HIT BY DOOR ONHEAD AT WORK
1
25
62
22 YO M PT WAS HIT IN THE FACE AND HEAD WHILE AT WORK HEADACHE DX CHI
1
22
11
22 YOF STATES A FLOWER POT FELL ON HER HAND AT WORK AND NOW HAS PAIN NO WORK INFO DX RIGHT HAND PAIN
2
22
62
End of preview.

Dataset Card for Dataset Name

Dataset Summary

Dataset used in 2018 NASA-Tournament-Lab organized in collaboration with National Institute for Occupational Safety and Health (NIOSH), The goal of the competition was to classify unstructured free-text “injury narratives” recorded in surveillance systems into injury codes from the Occupational Injuries and Illnesses Classification System (OIICS)

Supported Tasks and Leaderboards

This is a multi-class text classification task.The training dataset includes 48 classifiable event codes distributed across 7 categories:

  • Violence and other injuries by persons and animals
  • Transportation incidents
  • Fires and explosions
  • Falls, slips, and trips
  • Exposure to harmful substances or environments
  • Contact with objects and equipment
  • Overexertion and bodily reaction

For example the text 'DOING UNSPECIFIED LIFTING AT WORK AND DEVELOPED PAIN ACROSS CHEST CHEST PAIN' is coded by 71 which means 'Overexertion involving outside sources' More details on the categories and event codes can be found at: https://wwwn.cdc.gov/wisards/oiics/Trees/MultiTree.aspx?TreeType=Event

Languages

[More Information Needed]

Dataset Structure

Data Instances

[More Information Needed]

Data Fields

  • text: injury narrative description
  • sex : sex
  • age : age
  • event : OIICS code, which is the classfication label

Data Splits

name train test full_dataset
plain_text 153,956 75,864 229,820

Dataset Creation

Curation Rationale

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Source Data

Initial Data Collection and Normalization

[More Information Needed]

Who are the source language producers?

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Annotations

Annotation process

[More Information Needed]

Who are the annotators?

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Personal and Sensitive Information

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Considerations for Using the Data

Social Impact of Dataset

[More Information Needed]

Discussion of Biases

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Other Known Limitations

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Additional Information

Dataset Curators

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Licensing Information

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Citation Information

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Contributions

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