import os import numpy as np import pandas as pd from PIL import Image import matplotlib.pyplot as plt from atoms_detection.dataset import CoordinatesDataset from utils.constants import Split from utils.paths import DETECTION_LOGS, IMG_PATH, PRED_VIS_PATH, PT_DATASET if __name__ == "__main__": for name_file in os.listdir(DETECTION_LOGS): print(name_file) filepath = os.path.join(DETECTION_LOGS, name_file) image_name = os.path.splitext(name_file)[0] + ".tif" image_filename = os.path.join(IMG_PATH, image_name) img = Image.open(image_filename) df = pd.read_csv(filepath) x, y = [], [] for idx, row in df.iterrows(): x.append(row['x']) y.append(row['y']) img_arr = np.array(img).astype(np.float32) img_normed = (img_arr - img_arr.min()) / (img_arr.max() - img_arr.min()) plt.figure(figsize=(10, 10)) plt.axis('off') plt.imshow(img_normed) plt.scatter(x, y, s=300, linewidths=3, c='#FFDB1A', marker='+') vis_path = os.path.join(PRED_VIS_PATH, '{}.png'.format(os.path.splitext(image_name)[0])) plt.savefig(vis_path, bbox_inches='tight', pad_inches=0.0, transparent=True) plt.close()