atom-detection / utils /crops_visualization.py
Romain Graux
Initial commit with ml code and webapp
b2ffc9b
raw
history blame
No virus
748 Bytes
import os
import numpy as np
import pandas as pd
from PIL import Image
from matplotlib import pyplot as plt
from utils.constants import CropsColumns
from utils.paths import CROPS_DATASET, CROPS_PATH, CROPS_VIS_PATH
if not os.path.exists(CROPS_VIS_PATH):
os.makedirs(CROPS_VIS_PATH)
dataset_df = pd.read_csv(CROPS_DATASET)
for tif_name in dataset_df[CropsColumns.FILENAME]:
tif_filename = os.path.join(CROPS_PATH, tif_name)
img = Image.open(tif_filename)
img = np.array(img).astype(np.float32)
img = (img - img.min()) / img.max()
plt.tight_layout()
plt.imshow(img)
vis_name = "{}.jpg".format(os.path.splitext(tif_name)[0])
vis_filename = os.path.join(CROPS_VIS_PATH, vis_name)
plt.savefig(vis_filename)