Xueqing Wu
init
e20ef71
from functools import partial
import torch
import torch.nn as nn
from timm.models.layers import trunc_normal_, DropPath
from timm.models.vision_transformer import PatchEmbed
class Mlp(nn.Module):
""" MLP as used in Vision Transformer, MLP-Mixer and related networks
"""
def __init__(self, in_features, hidden_features=None, out_features=None, act_layer=nn.GELU, drop=0.):
super().__init__()
out_features = out_features or in_features
hidden_features = hidden_features or in_features
self.fc1 = nn.Linear(in_features, hidden_features)
self.act = act_layer()
self.fc2 = nn.Linear(hidden_features, out_features)
self.drop = nn.Dropout(drop)
def forward(self, x):
x = self.fc1(x)
x = self.act(x)
x = self.drop(x)
x = self.fc2(x)
x = self.drop(x)
return x
class Attention(nn.Module):
def __init__(self, dim, num_heads=8, qkv_bias=False, qk_scale=None, attn_drop=0., proj_drop=0.):
super().__init__()
self.num_heads = num_heads
head_dim = dim // num_heads
# NOTE scale factor was wrong in my original version, can set manually to be compat with prev weights
self.scale = qk_scale or head_dim ** -0.5
self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias)
self.attn_drop = nn.Dropout(attn_drop)
self.proj = nn.Linear(dim, dim)
self.proj_drop = nn.Dropout(proj_drop)
self.attn_gradients = None
self.attention_map = None
def save_attn_gradients(self, attn_gradients):
self.attn_gradients = attn_gradients
def get_attn_gradients(self):
return self.attn_gradients
def save_attention_map(self, attention_map):
self.attention_map = attention_map
def get_attention_map(self):
return self.attention_map
def forward(self, x, register_hook=False, image_atts=None):
B, N, C = x.shape
qkv = self.qkv(x).reshape(B, N, 3, self.num_heads, C // self.num_heads).permute(2, 0, 3, 1, 4)
q, k, v = qkv[0], qkv[1], qkv[2] # make torchscript happy (cannot use tensor as tuple)
attn = (q @ k.transpose(-2, -1)) * self.scale
if image_atts is not None:
attn += image_atts
attn = attn.softmax(dim=-1)
attn = self.attn_drop(attn)
if register_hook:
self.save_attention_map(attn)
attn.register_hook(self.save_attn_gradients)
# attn: (bs, num_heads, num_patches, num_patches)
# v: (bs, num_heads, num_patches, d)
# attn @ v: (bs, num_heads, num_patches, d)
x = (attn @ v).transpose(1, 2).reshape(B, N, C)
x = self.proj(x)
x = self.proj_drop(x)
return x
class Block(nn.Module):
def __init__(self, dim, num_heads, mlp_ratio=4., qkv_bias=False, qk_scale=None, drop=0., attn_drop=0.,
drop_path=0., act_layer=nn.GELU, norm_layer=nn.LayerNorm):
super().__init__()
self.norm1 = norm_layer(dim)
self.attn = Attention(
dim, num_heads=num_heads, qkv_bias=qkv_bias, qk_scale=qk_scale, attn_drop=attn_drop, proj_drop=drop)
# NOTE: drop path for stochastic depth, we shall see if this is better than dropout here
self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity()
self.norm2 = norm_layer(dim)
mlp_hidden_dim = int(dim * mlp_ratio)
self.mlp = Mlp(in_features=dim, hidden_features=mlp_hidden_dim, act_layer=act_layer, drop=drop)
def forward(self, x, register_hook=False, image_atts=None):
x = x + self.drop_path(self.attn(self.norm1(x), register_hook=register_hook, image_atts=image_atts))
x = x + self.drop_path(self.mlp(self.norm2(x)))
return x
class VisionTransformer(nn.Module):
""" Vision Transformer
A PyTorch impl of : `An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale` -
https://arxiv.org/abs/2010.11929
"""
def __init__(self, img_size=224, patch_size=16, in_chans=3, num_classes=1000, embed_dim=768, depth=12,
num_heads=12, mlp_ratio=4., qkv_bias=True, qk_scale=None, representation_size=None,
drop_rate=0., attn_drop_rate=0., drop_path_rate=0., norm_layer=None, local_attn_depth=0):
"""
Args:
img_size (int, tuple): input image size
patch_size (int, tuple): patch size
in_chans (int): number of input channels
num_classes (int): number of classes for classification head
embed_dim (int): embedding dimension
depth (int): depth of transformer
num_heads (int): number of attention heads
mlp_ratio (int): ratio of mlp hidden dim to embedding dim
qkv_bias (bool): enable bias for qkv if True
qk_scale (float): override default qk scale of head_dim ** -0.5 if set
representation_size (Optional[int]): enable and set representation layer (pre-logits) to this value if set
drop_rate (float): dropout rate
attn_drop_rate (float): attention dropout rate
drop_path_rate (float): stochastic depth rate
norm_layer: (nn.Module): normalization layer
"""
super().__init__()
self.num_features = self.embed_dim = embed_dim # num_features for consistency with other models
norm_layer = norm_layer or partial(nn.LayerNorm, eps=1e-6)
self.patch_embed = PatchEmbed(
img_size=img_size, patch_size=patch_size, in_chans=in_chans, embed_dim=embed_dim)
self.num_patch_embed = self.patch_embed.num_patches
self.cls_token = nn.Parameter(torch.zeros(1, 1, embed_dim))
self.num_pos_embed = self.num_patch_embed + 1
self.pos_embed = nn.Parameter(torch.zeros(1, self.num_pos_embed, embed_dim))
self.pos_drop = nn.Dropout(p=drop_rate)
dpr = [x.item() for x in torch.linspace(0, drop_path_rate, depth)] # stochastic depth decay rule
self.blocks = nn.ModuleList([
Block(
dim=embed_dim, num_heads=num_heads, mlp_ratio=mlp_ratio, qkv_bias=qkv_bias, qk_scale=qk_scale,
drop=drop_rate, attn_drop=attn_drop_rate, drop_path=dpr[i], norm_layer=norm_layer)
for i in range(depth)])
self.depth = depth
self.local_attn_depth = local_attn_depth # do local attn from index=(depth - local_attn_depth)
self.norm = norm_layer(embed_dim)
trunc_normal_(self.pos_embed, std=.02)
trunc_normal_(self.cls_token, std=.02)
self.apply(self._init_weights)
def _init_weights(self, m):
if isinstance(m, nn.Linear):
trunc_normal_(m.weight, std=.02)
if isinstance(m, nn.Linear) and m.bias is not None:
nn.init.constant_(m.bias, 0)
elif isinstance(m, nn.LayerNorm):
nn.init.constant_(m.bias, 0)
nn.init.constant_(m.weight, 1.0)
@torch.jit.ignore
def no_weight_decay(self):
return {'pos_embed', 'cls_token'}
def forward(self, x, register_blk=-1, idx_to_group_img=None, image_atts=None):
B = x.shape[0]
x = self.patch_embed(x)
cls_tokens = self.cls_token.expand(B, -1, -1) # stole cls_tokens impl from Phil Wang, thanks
x = torch.cat((cls_tokens, x), dim=1)
x = x + self.pos_embed[:, :x.size(1), :]
x = self.pos_drop(x)
do_gather = True if idx_to_group_img is not None else False
if do_gather and (image_atts is not None):
full_atts = torch.ones(x.shape[:2], dtype=x.dtype).to(x.device)
image_atts_blk = torch.cat([image_atts, full_atts], dim=0)
image_atts_blk = image_atts_blk.unsqueeze(1).unsqueeze(2)
image_atts_blk = (1.0 - image_atts_blk) * -10000.0
else:
image_atts_blk = None
for i, blk in enumerate(self.blocks):
if (self.local_attn_depth > 0) and (i >= self.depth - self.local_attn_depth):
if do_gather:
do_gather = False
x_bs = torch.gather(x, dim=0,
index=idx_to_group_img.view(-1, 1, 1).expand(-1, x.shape[1], x.shape[2]))
x = torch.cat([x_bs, x], dim=0)
x = blk(x, register_blk == i, image_atts=image_atts_blk)
else:
x = blk(x, register_blk == i, image_atts=None)
x = self.norm(x)
if idx_to_group_img is not None:
bs = len(idx_to_group_img)
x_bs, x_fullatts = torch.split(x, [bs, x.size(0) - bs])
return x_bs, x_fullatts
return x
def interpolate_pos_embed(pos_embed_checkpoint, num_patches, num_extra_tokens=1):
# num_patches = visual_encoder.num_patch_embed
# num_extra_tokens = visual_encoder.num_pos_embed - visual_encoder.num_patch_embed
# interpolate position embedding
embedding_size = pos_embed_checkpoint.shape[-1]
# height (== width) for the checkpoint position embedding
orig_size = int((pos_embed_checkpoint.shape[-2] - num_extra_tokens) ** 0.5)
# height (== width) for the new position embedding
new_size = int(num_patches ** 0.5)
if orig_size != new_size:
# class_token and dist_token are kept unchanged
extra_tokens = pos_embed_checkpoint[:, :num_extra_tokens]
# only the position tokens are interpolated
pos_tokens = pos_embed_checkpoint[:, num_extra_tokens:]
pos_tokens = pos_tokens.reshape(-1, orig_size, orig_size, embedding_size).permute(0, 3, 1, 2)
pos_tokens = torch.nn.functional.interpolate(
pos_tokens, size=(new_size, new_size), mode='bicubic', align_corners=False)
pos_tokens = pos_tokens.permute(0, 2, 3, 1).flatten(1, 2)
new_pos_embed = torch.cat((extra_tokens, pos_tokens), dim=1)
# print('reshape position embedding from %d to %d' % (orig_size ** 2, new_size ** 2))
return new_pos_embed
else:
return pos_embed_checkpoint