SungBeom's picture
Upload folder using huggingface_hub
4a51346
raw
history blame
9.19 kB
from chromadb.db.base import SqlDB, ParameterValue, get_sql
from chromadb.ingest import (
Producer,
Consumer,
encode_vector,
decode_vector,
ConsumerCallbackFn,
)
from chromadb.types import (
SubmitEmbeddingRecord,
EmbeddingRecord,
SeqId,
ScalarEncoding,
Operation,
)
from chromadb.config import System
from overrides import override
from collections import defaultdict
from typing import Tuple, Optional, Dict, Set, cast
from uuid import UUID
from pypika import Table, functions
import uuid
import json
import logging
logger = logging.getLogger(__name__)
_operation_codes = {
Operation.ADD: 0,
Operation.UPDATE: 1,
Operation.UPSERT: 2,
Operation.DELETE: 3,
}
_operation_codes_inv = {v: k for k, v in _operation_codes.items()}
class SqlEmbeddingsQueue(SqlDB, Producer, Consumer):
"""A SQL database that stores embeddings, allowing a traditional RDBMS to be used as
the primary ingest queue and satisfying the top level Producer/Consumer interfaces.
Note that this class is only suitable for use cases where the producer and consumer
are in the same process.
This is because notifiaction of new embeddings happens solely in-process: this
implementation does not actively listen to the the database for new records added by
other processes.
"""
class Subscription:
id: UUID
topic_name: str
start: int
end: int
callback: ConsumerCallbackFn
def __init__(
self,
id: UUID,
topic_name: str,
start: int,
end: int,
callback: ConsumerCallbackFn,
):
self.id = id
self.topic_name = topic_name
self.start = start
self.end = end
self.callback = callback
_subscriptions: Dict[str, Set[Subscription]]
def __init__(self, system: System):
self._subscriptions = defaultdict(set)
super().__init__(system)
@override
def reset(self) -> None:
super().reset()
self._subscriptions = defaultdict(set)
@override
def create_topic(self, topic_name: str) -> None:
# Topic creation is implicit for this impl
pass
@override
def delete_topic(self, topic_name: str) -> None:
t = Table("embeddings_queue")
q = (
self.querybuilder()
.from_(t)
.where(t.topic == ParameterValue(topic_name))
.delete()
)
with self.tx() as cur:
sql, params = get_sql(q, self.parameter_format())
cur.execute(sql, params)
@override
def submit_embedding(
self, topic_name: str, embedding: SubmitEmbeddingRecord
) -> SeqId:
if not self._running:
raise RuntimeError("Component not running")
if embedding["embedding"]:
encoding_type = cast(ScalarEncoding, embedding["encoding"])
encoding = encoding_type.value
embedding_bytes = encode_vector(embedding["embedding"], encoding_type)
else:
embedding_bytes = None
encoding = None
metadata = json.dumps(embedding["metadata"]) if embedding["metadata"] else None
t = Table("embeddings_queue")
insert = (
self.querybuilder()
.into(t)
.columns(t.operation, t.topic, t.id, t.vector, t.encoding, t.metadata)
.insert(
ParameterValue(_operation_codes[embedding["operation"]]),
ParameterValue(topic_name),
ParameterValue(embedding["id"]),
ParameterValue(embedding_bytes),
ParameterValue(encoding),
ParameterValue(metadata),
)
)
with self.tx() as cur:
sql, params = get_sql(insert, self.parameter_format())
sql = f"{sql} RETURNING seq_id" # Pypika doesn't support RETURNING
seq_id = int(cur.execute(sql, params).fetchone()[0])
embedding_record = EmbeddingRecord(
id=embedding["id"],
seq_id=seq_id,
embedding=embedding["embedding"],
encoding=embedding["encoding"],
metadata=embedding["metadata"],
operation=embedding["operation"],
)
self._notify_all(topic_name, embedding_record)
return seq_id
@override
def subscribe(
self,
topic_name: str,
consume_fn: ConsumerCallbackFn,
start: Optional[SeqId] = None,
end: Optional[SeqId] = None,
id: Optional[UUID] = None,
) -> UUID:
if not self._running:
raise RuntimeError("Component not running")
subscription_id = id or uuid.uuid4()
start, end = self._validate_range(start, end)
subscription = self.Subscription(
subscription_id, topic_name, start, end, consume_fn
)
# Backfill first, so if it errors we do not add the subscription
self._backfill(subscription)
self._subscriptions[topic_name].add(subscription)
return subscription_id
@override
def unsubscribe(self, subscription_id: UUID) -> None:
for topic_name, subscriptions in self._subscriptions.items():
for subscription in subscriptions:
if subscription.id == subscription_id:
subscriptions.remove(subscription)
if len(subscriptions) == 0:
del self._subscriptions[topic_name]
return
@override
def min_seqid(self) -> SeqId:
return -1
@override
def max_seqid(self) -> SeqId:
return 2**63 - 1
def _backfill(self, subscription: Subscription) -> None:
"""Backfill the given subscription with any currently matching records in the
DB"""
t = Table("embeddings_queue")
q = (
self.querybuilder()
.from_(t)
.where(t.topic == ParameterValue(subscription.topic_name))
.where(t.seq_id > ParameterValue(subscription.start))
.where(t.seq_id <= ParameterValue(subscription.end))
.select(t.seq_id, t.operation, t.id, t.vector, t.encoding, t.metadata)
.orderby(t.seq_id)
)
with self.tx() as cur:
sql, params = get_sql(q, self.parameter_format())
cur.execute(sql, params)
rows = cur.fetchall()
for row in rows:
if row[3]:
encoding = ScalarEncoding(row[4])
vector = decode_vector(row[3], encoding)
else:
encoding = None
vector = None
self._notify_one(
subscription,
EmbeddingRecord(
seq_id=row[0],
operation=_operation_codes_inv[row[1]],
id=row[2],
embedding=vector,
encoding=encoding,
metadata=json.loads(row[5]) if row[5] else None,
),
)
def _validate_range(
self, start: Optional[SeqId], end: Optional[SeqId]
) -> Tuple[int, int]:
"""Validate and normalize the start and end SeqIDs for a subscription using this
impl."""
start = start or self._next_seq_id()
end = end or self.max_seqid()
if not isinstance(start, int) or not isinstance(end, int):
raise ValueError("SeqIDs must be integers for sql-based EmbeddingsDB")
if start >= end:
raise ValueError(f"Invalid SeqID range: {start} to {end}")
return start, end
def _next_seq_id(self) -> int:
"""Get the next SeqID for this database."""
t = Table("embeddings_queue")
q = self.querybuilder().from_(t).select(functions.Max(t.seq_id))
with self.tx() as cur:
cur.execute(q.get_sql())
return int(cur.fetchone()[0]) + 1
def _notify_all(self, topic: str, embedding: EmbeddingRecord) -> None:
"""Send a notification to each subscriber of the given topic."""
if self._running:
for sub in self._subscriptions[topic]:
self._notify_one(sub, embedding)
def _notify_one(self, sub: Subscription, embedding: EmbeddingRecord) -> None:
"""Send a notification to a single subscriber."""
if embedding["seq_id"] > sub.end:
self.unsubscribe(sub.id)
return
if embedding["seq_id"] <= sub.start:
return
# Log errors instead of throwing them to preserve async semantics
# for consistency between local and distributed configurations
try:
sub.callback([embedding])
except BaseException as e:
id = embedding.get("id", embedding.get("delete_id"))
logger.error(
f"Exception occurred invoking consumer for subscription {sub.id}"
+ f"to topic {sub.topic_name} for embedding id {id} ",
e,
)