Baskar2005
commited on
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•
498f257
1
Parent(s):
6f32d20
Create app.py
Browse files
app.py
ADDED
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import tensorflow as tf
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import random
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from PIL import Image
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from tensorflow import keras
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import numpy as np
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import os
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import logging
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from tensorflow.keras.preprocessing import image as keras_image
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from huggingface_hub import from_pretrained_keras
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from openai import AzureOpenAI
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import gradio as gr
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from zipfile import ZipFile
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logging.basicConfig(level=logging.INFO)
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class DiseaseDetectionApp:
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def __init__(self):
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# api_key=os.getenv['AZURE_OPENAI_API_KEY']
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# endpoint=os.getenv['AZURE_OPENAI_ENDPOINT']
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# api_version=os.getenv['OPENAI_API_VERSION']
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self.class_names = [
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"Normal",
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"PNEUMONIA",
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]
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keras.utils.set_random_seed(42)
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self.model = from_pretrained_keras("ryefoxlime/PneumoniaDetection")
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self.client=AzureOpenAI()
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def predict_disease(self, image_path):
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"""
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Predict the disease present in the X-Ray image.
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Args:
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- image_data: PIL image data
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Returns:
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- predicted_disease: string
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"""
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try:
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# Load the image file, resizing it to the dimensions expected by the model
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img = keras_image.load_img(image_path, target_size=(224, 224)) # Adjust target_size according to your model's expected input dimensions
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# Convert the image to a numpy array
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img_array = keras_image.img_to_array(img)
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# Add an additional dimension to the array: (1, height, width, channels)
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img_array = tf.expand_dims(img_array, 0) # Model expects a batch of images, but we're only passing a single image
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# Make predictions
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predictions =self.model.predict(img_array)
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# Extract the predicted class and confidence
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predict_class = self.class_names[np.argmax(predictions[0])]
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# confidence = round(100 * np.max(predictions[0]), 2)
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return predict_class
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except Exception as e:
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logging.error(f"Error predicting disease: {str(e)}")
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return None
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def classify_disease(self,image_path):
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disease_name=self.predict_disease(image_path)
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print(disease_name)
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if disease_name=="PNEUMONIA":
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conversation = [
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{"role": "system", "content": "You are a medical assistant"},
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{"role": "user", "content": f""" your task describe(classify) about the given disease as summary only in 3 lines.
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```{disease_name}```
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"""}
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]
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# Generate completion using ChatGPT model
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response = self.client.chat.completions.create(
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model="ChatGPT",
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messages=conversation,
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temperature=0,
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max_tokens=1000
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)
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# Get the generated topics message
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result = response.choices[0].message.content
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return disease_name,result
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elif disease_name=="Normal":
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result="No problem in your xray image"
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return disease_name,result
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else:
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logging.error("Error classify_disease disease")
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return "Something went wrong"
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def unzip_image_data(self):
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"""
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Unzips an image dataset into a specified directory.
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Returns:
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str: The path to the directory containing the extracted image files.
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"""
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try:
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with ZipFile("image_dataset.zip","r") as extract:
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directory_path="dataset_image"
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extract.extractall(f"{directory_path}")
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return f"{directory_path}"
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except Exception as e:
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logging.error(f"An error occurred during extraction: {e}")
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return ""
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def example_images(self):
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"""
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Unzips the image dataset and generates a list of paths to the individual image files and use image for showing example
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Returns:
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List[str]: A list of file paths to each image in the dataset.
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"""
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image_dataset_folder = self.unzip_image_data()
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image_extensions = ['.jpg', '.jpeg', '.png', '.gif', '.bmp', '.tiff', '.webp']
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image_count = len([name for name in os.listdir(image_dataset_folder) if os.path.isfile(os.path.join(image_dataset_folder, name)) and os.path.splitext(name)[1].lower() in image_extensions])
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example=[]
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for i in range(image_count):
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for name in os.listdir(image_dataset_folder):
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path=(os.path.join(os.path.dirname(image_dataset_folder),os.path.join(image_dataset_folder,name)))
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example.append(path)
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print()
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return example
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def gradio_interface(self):
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with gr.Blocks(theme='JohnSmith9982/small_and_pretty') as demo:
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gr.HTML("""<center><h1>Pneumonia Disease Detection</h1></center>""")
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exam_img=self.example_images()
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with gr.Row():
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input_image =gr.Image(type="filepath",sources="upload")
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with gr.Column():
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output=gr.Label(label="Disease Name")
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with gr.Row():
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classify_disease_=gr.Textbox(label="About disease")
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with gr.Row():
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button =gr.Button(value="Detect The Disease")
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button.click(self.classify_disease,[input_image],[output,classify_disease_])
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gr.Examples(
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examples=exam_img,
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inputs=[input_image],
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outputs=[output,classify_disease_],
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fn=self.classify_disease,
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cache_examples=False)
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demo.launch(debug=True)
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if __name__ == "__main__":
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app = DiseaseDetectionApp()
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result=app.gradio_interface()
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