--- license: cc-by-4.0 library_name: scvi-tools tags: - biology - genomics - single-cell - model_cls_name:CondSCVI - scvi_version:1.1.0 - anndata_version:0.10.3 - modality:rna - tissue:Small_Intestine - annotated:True --- # Description Tabula Sapiens is a benchmark, first-draft human cell atlas of nearly 500,000 cells from 24 organs of 15 normal human subjects. # Model properties Many model properties are in the model tags. Some more are listed below. **model_init_params**: ```json { "n_hidden": 128, "n_latent": 5, "n_layers": 2, "weight_obs": false, "dropout_rate": 0.05 } ``` **model_setup_anndata_args**: ```json { "labels_key": "cell_ontology_class", "layer": null } ``` **model_summary_stats**: | Summary Stat Key | Value | |------------------|-------| | n_cells | 10458 | | n_labels | 16 | | n_vars | 4000 | **model_data_registry**: | Registry Key | scvi-tools Location | |--------------|---------------------------| | X | adata.X | | labels | adata.obs['_scvi_labels'] | **model_parent_module**: scvi.model **data_is_minified**: False # Training data This is an optional link to where the training data is stored if it is too large to host on the huggingface Model hub. Training data url: https://zenodo.org/records/7608635/files/Small_Intestine_training_data.h5ad # Training code This is an optional link to the code used to train the model. Training code url: N/A # References The Tabula Sapiens Consortium. The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans. Science, May 2022. doi:10.1126/science.abl4896