submit

config.json

@@ -0,0 +1,27 @@
+{
+  "_name_or_path": "./models/ltg_bert_joint_50M_50M_nucleus_1/checkpoint/",
+  "architectures": [
+    "LtgBertForMaskedLM"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "auto_map": {
+    "AutoConfig": "configuration_ltgbert.LtgBertConfig",
+    "AutoModelForMaskedLM": "modeling_ltgbert.LtgBertForMaskedLM",
+    "AutoModelForSequenceClassification": "babylm/ltgbert-100m-2024--modeling_ltgbert.LtgBertForSequenceClassification"
+  },
+  "classifier_dropout": 0.2,
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 768,
+  "intermediate_size": 2048,
+  "layer_norm_eps": 1e-07,
+  "max_position_embeddings": 512,
+  "model_type": "ltgbert",
+  "num_attention_heads": 12,
+  "num_hidden_layers": 12,
+  "output_all_encoded_layers": true,
+  "pad_token_id": 4,
+  "position_bucket_size": 32,
+  "torch_dtype": "float32",
+  "transformers_version": "4.42.3",
+  "vocab_size": 16384
+}

configuration_ltgbert.py

@@ -0,0 +1,107 @@
+# coding=utf-8
+# Copyright 2023 Language Technology Group from University of Oslo and The HuggingFace Inc. team.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+""" LTG-BERT configutation """
+
+
+from transformers.configuration_utils import PretrainedConfig
+
+
+LTG_BERT_PRETRAINED_CONFIG_ARCHIVE_MAP = {
+    "bnc-bert-span": "https://huggingface.co/ltg/bnc-bert-span",
+    "bnc-bert-span-2x": "https://huggingface.co/ltg/bnc-bert-span-2x",
+    "bnc-bert-span-0.5x": "https://huggingface.co/ltg/bnc-bert-span-0.5x",
+    "bnc-bert-span-0.25x": "https://huggingface.co/ltg/bnc-bert-span-0.25x",
+    "bnc-bert-span-order": "https://huggingface.co/ltg/bnc-bert-span-order",
+    "bnc-bert-span-document": "https://huggingface.co/ltg/bnc-bert-span-document",
+    "bnc-bert-span-word": "https://huggingface.co/ltg/bnc-bert-span-word",
+    "bnc-bert-span-subword": "https://huggingface.co/ltg/bnc-bert-span-subword",
+
+    "norbert3-xs": "https://huggingface.co/ltg/norbert3-xs/config.json",
+    "norbert3-small": "https://huggingface.co/ltg/norbert3-small/config.json",
+    "norbert3-base": "https://huggingface.co/ltg/norbert3-base/config.json",
+    "norbert3-large": "https://huggingface.co/ltg/norbert3-large/config.json",
+
+    "norbert3-oversampled-base": "https://huggingface.co/ltg/norbert3-oversampled-base/config.json",
+    "norbert3-ncc-base": "https://huggingface.co/ltg/norbert3-ncc-base/config.json",
+    "norbert3-nak-base": "https://huggingface.co/ltg/norbert3-nak-base/config.json",
+    "norbert3-nb-base": "https://huggingface.co/ltg/norbert3-nb-base/config.json",
+    "norbert3-wiki-base": "https://huggingface.co/ltg/norbert3-wiki-base/config.json",
+    "norbert3-c4-base": "https://huggingface.co/ltg/norbert3-c4-base/config.json"
+}
+
+
+class LtgBertConfig(PretrainedConfig):
+    r"""
+    This is the configuration class to store the configuration of a [`LtgBertModel`]. It is used to
+    instantiate an LTG-BERT model according to the specified arguments, defining the model architecture.
+    Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
+    documentation from [`PretrainedConfig`] for more information.
+    Args:
+        vocab_size (`int`, *optional*, defaults to 16384):
+            Vocabulary size of the LTG-BERT model. Defines the number of different tokens that can be represented by the
+            `inputs_ids` passed when calling [`LtgBertModel`].
+        hidden_size (`int`, *optional*, defaults to 768):
+            Dimensionality of the encoder layers and the pooler layer.
+        num_hidden_layers (`int`, *optional*, defaults to 12):
+            Number of hidden layers in the Transformer encoder.
+        num_attention_heads (`int`, *optional*, defaults to 12):
+            Number of attention heads for each attention layer in the Transformer encoder.
+        intermediate_size (`int`, *optional*, defaults to 2048):
+            Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
+        hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
+            The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
+        attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
+            The dropout ratio for the attention probabilities.
+        max_position_embeddings (`int`, *optional*, defaults to 512):
+            The maximum sequence length that this model might ever be used with. Typically set this to something large
+            just in case (e.g., 512 or 1024 or 2048).
+        layer_norm_eps (`float`, *optional*, defaults to 1e-12):
+            The epsilon used by the layer normalization layers.
+        classifier_dropout (`float`, *optional*):
+            The dropout ratio for the classification head.
+    """
+    model_type = "ltgbert"
+    def __init__(
+        self,
+        vocab_size=16384,
+        attention_probs_dropout_prob=0.1,
+        hidden_dropout_prob=0.1,
+        hidden_size=768,
+        intermediate_size=2048,
+        max_position_embeddings=512,
+        position_bucket_size=32,
+        num_attention_heads=12,
+        num_hidden_layers=12,
+        layer_norm_eps=1.0e-7,
+        pad_token_id=4,
+        output_all_encoded_layers=True,
+        classifier_dropout=None,
+        **kwargs,
+    ):
+        super().__init__(pad_token_id=pad_token_id, **kwargs)
+
+        self.vocab_size = vocab_size
+        self.hidden_size = hidden_size
+        self.num_hidden_layers = num_hidden_layers
+        self.num_attention_heads = num_attention_heads
+        self.intermediate_size = intermediate_size
+        self.hidden_dropout_prob = hidden_dropout_prob
+        self.attention_probs_dropout_prob = attention_probs_dropout_prob
+        self.max_position_embeddings = max_position_embeddings
+        self.output_all_encoded_layers = output_all_encoded_layers
+        self.position_bucket_size = position_bucket_size
+        self.layer_norm_eps = layer_norm_eps
+        self.classifier_dropout = classifier_dropout

modeling_ltgbert.py

@@ -0,0 +1,816 @@
+# coding=utf-8
+# Copyright 2023 Language Technology Group from University of Oslo and The HuggingFace Inc. team.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+""" PyTorch LTG-BERT model."""
+
+
+import math
+from typing import List, Optional, Tuple, Union
+
+import torch
+import torch.nn as nn
+import torch.nn.functional as F
+from torch.utils import checkpoint
+
+from .configuration_ltgbert import LtgBertConfig
+from transformers.modeling_utils import PreTrainedModel
+from transformers.activations import gelu_new
+from transformers.modeling_outputs import (
+    MaskedLMOutput,
+    MultipleChoiceModelOutput,
+    QuestionAnsweringModelOutput,
+    SequenceClassifierOutput,
+    TokenClassifierOutput,
+    BaseModelOutput
+)
+from transformers.pytorch_utils import softmax_backward_data
+from transformers.utils import add_start_docstrings, add_start_docstrings_to_model_forward
+
+
+_CHECKPOINT_FOR_DOC = "ltg/bnc-bert-span"
+_CONFIG_FOR_DOC = "LtgBertConfig"
+
+
+LTG_BERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
+    "bnc-bert-span",
+    "bnc-bert-span-2x",
+    "bnc-bert-span-0.5x",
+    "bnc-bert-span-0.25x",
+    "bnc-bert-span-order",
+    "bnc-bert-span-document",
+    "bnc-bert-span-word",
+    "bnc-bert-span-subword",
+
+    "norbert3-xs",
+    "norbert3-small",
+    "norbert3-base",
+    "norbert3-large",
+
+    "norbert3-oversampled-base",
+    "norbert3-ncc-base",
+    "norbert3-nak-base",
+    "norbert3-nb-base",
+    "norbert3-wiki-base",
+    "norbert3-c4-base"
+]
+
+
+class Encoder(nn.Module):
+    def __init__(self, config, activation_checkpointing=False):
+        super().__init__()
+        self.layers = nn.ModuleList([EncoderLayer(config) for _ in range(config.num_hidden_layers)])
+
+        for i, layer in enumerate(self.layers):
+            layer.mlp.mlp[1].weight.data *= math.sqrt(1.0 / (2.0 * (1 + i)))
+            layer.mlp.mlp[-2].weight.data *= math.sqrt(1.0 / (2.0 * (1 + i)))
+
+        self.activation_checkpointing = activation_checkpointing
+    
+    def forward(self, hidden_states, attention_mask, relative_embedding):
+        hidden_states, attention_probs = [hidden_states], []
+
+        for layer in self.layers:
+            if self.activation_checkpointing:
+                hidden_state, attention_p = checkpoint.checkpoint(layer, hidden_states[-1], attention_mask, relative_embedding)
+            else:
+                hidden_state, attention_p = layer(hidden_states[-1], attention_mask, relative_embedding)
+
+            hidden_states.append(hidden_state)
+            attention_probs.append(attention_p)
+
+        return hidden_states, attention_probs
+
+
+class MaskClassifier(nn.Module):
+    def __init__(self, config, subword_embedding):
+        super().__init__()
+        self.nonlinearity = nn.Sequential(
+            nn.LayerNorm(config.hidden_size, config.layer_norm_eps, elementwise_affine=False),
+            nn.Linear(config.hidden_size, config.hidden_size),
+            nn.GELU(),
+            nn.LayerNorm(config.hidden_size, config.layer_norm_eps, elementwise_affine=False),
+            nn.Dropout(config.hidden_dropout_prob),
+            nn.Linear(subword_embedding.size(1), subword_embedding.size(0))
+        )
+        self.initialize(config.hidden_size, subword_embedding)
+
+    def initialize(self, hidden_size, embedding):
+        std = math.sqrt(2.0 / (5.0 * hidden_size))
+        nn.init.trunc_normal_(self.nonlinearity[1].weight, mean=0.0, std=std, a=-2*std, b=2*std)
+        self.nonlinearity[-1].weight = embedding
+        self.nonlinearity[1].bias.data.zero_()
+        self.nonlinearity[-1].bias.data.zero_()
+
+    def forward(self, x, masked_lm_labels=None):
+        if masked_lm_labels is not None:
+            x = torch.index_select(x.flatten(0, 1), 0, torch.nonzero(masked_lm_labels.flatten() != -100).squeeze())
+        x = self.nonlinearity(x)
+        return x
+
+
+class EncoderLayer(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.attention = Attention(config)
+        self.mlp = FeedForward(config)
+
+    def forward(self, x, padding_mask, relative_embedding):
+        attention_output, attention_probs = self.attention(x, padding_mask, relative_embedding)
+        x = x + attention_output
+        x = x + self.mlp(x)
+        return x, attention_probs
+
+
+class GeGLU(nn.Module):
+    def forward(self, x):
+        x, gate = x.chunk(2, dim=-1)
+        x = x * gelu_new(gate)
+        return x
+
+
+class FeedForward(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.mlp = nn.Sequential(
+            nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps, elementwise_affine=False),
+            nn.Linear(config.hidden_size, 2*config.intermediate_size, bias=False),
+            GeGLU(),
+            nn.LayerNorm(config.intermediate_size, eps=config.layer_norm_eps, elementwise_affine=False),
+            nn.Linear(config.intermediate_size, config.hidden_size, bias=False),
+            nn.Dropout(config.hidden_dropout_prob)
+        )
+        self.initialize(config.hidden_size)
+
+    def initialize(self, hidden_size):
+        std = math.sqrt(2.0 / (5.0 * hidden_size))
+        nn.init.trunc_normal_(self.mlp[1].weight, mean=0.0, std=std, a=-2*std, b=2*std)
+        nn.init.trunc_normal_(self.mlp[-2].weight, mean=0.0, std=std, a=-2*std, b=2*std)
+
+    def forward(self, x):
+        return self.mlp(x)
+
+
+class MaskedSoftmax(torch.autograd.Function):
+    @staticmethod
+    def forward(self, x, mask, dim):
+        self.dim = dim
+        x.masked_fill_(mask, float('-inf'))
+        x = torch.softmax(x, self.dim)
+        x.masked_fill_(mask, 0.0)
+        self.save_for_backward(x)
+        return x
+
+    @staticmethod
+    def backward(self, grad_output):
+        output, = self.saved_tensors
+        input_grad = softmax_backward_data(self, grad_output, output, self.dim, output)
+        return input_grad, None, None
+
+
+class Attention(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+
+        self.config = config
+
+        if config.hidden_size % config.num_attention_heads != 0:
+            raise ValueError(f"The hidden size {config.hidden_size} is not a multiple of the number of attention heads {config.num_attention_heads}")
+
+        self.hidden_size = config.hidden_size
+        self.num_heads = config.num_attention_heads
+        self.head_size = config.hidden_size // config.num_attention_heads
+
+        self.in_proj_qk = nn.Linear(config.hidden_size, 2*config.hidden_size, bias=True)
+        self.in_proj_v = nn.Linear(config.hidden_size, config.hidden_size, bias=True)
+        self.out_proj = nn.Linear(config.hidden_size, config.hidden_size, bias=True)
+
+        self.pre_layer_norm = nn.LayerNorm(config.hidden_size, config.layer_norm_eps, elementwise_affine=False)
+        self.post_layer_norm = nn.LayerNorm(config.hidden_size, config.layer_norm_eps, elementwise_affine=True)
+
+        position_indices = torch.arange(config.max_position_embeddings, dtype=torch.long).unsqueeze(1) \
+            - torch.arange(config.max_position_embeddings, dtype=torch.long).unsqueeze(0)
+        position_indices = self.make_log_bucket_position(position_indices, config.position_bucket_size, config.max_position_embeddings)
+        position_indices = config.position_bucket_size - 1 + position_indices
+        self.register_buffer("position_indices", position_indices, persistent=True)
+
+        self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
+        self.scale = 1.0 / math.sqrt(3 * self.head_size)
+        self.initialize()
+
+    def make_log_bucket_position(self, relative_pos, bucket_size, max_position):
+        sign = torch.sign(relative_pos)
+        mid = bucket_size // 2
+        abs_pos = torch.where((relative_pos < mid) & (relative_pos > -mid), mid - 1, torch.abs(relative_pos).clamp(max=max_position - 1))
+        log_pos = torch.ceil(torch.log(abs_pos / mid) / math.log((max_position-1) / mid) * (mid - 1)).int() + mid
+        bucket_pos = torch.where(abs_pos <= mid, relative_pos, log_pos * sign).long()
+        return bucket_pos
+
+    def initialize(self):
+        std = math.sqrt(2.0 / (5.0 * self.hidden_size))
+        nn.init.trunc_normal_(self.in_proj_qk.weight, mean=0.0, std=std, a=-2*std, b=2*std)
+        nn.init.trunc_normal_(self.in_proj_v.weight, mean=0.0, std=std, a=-2*std, b=2*std)
+        nn.init.trunc_normal_(self.out_proj.weight, mean=0.0, std=std, a=-2*std, b=2*std)
+        self.in_proj_qk.bias.data.zero_()
+        self.in_proj_v.bias.data.zero_()
+        self.out_proj.bias.data.zero_()
+
+    def compute_attention_scores(self, hidden_states, relative_embedding):
+        key_len, batch_size, _ = hidden_states.size()
+        query_len = key_len
+
+        if self.position_indices.size(0) < query_len:
+            position_indices = torch.arange(query_len, dtype=torch.long).unsqueeze(1) \
+                - torch.arange(query_len, dtype=torch.long).unsqueeze(0)
+            position_indices = self.make_log_bucket_position(position_indices, self.config.position_bucket_size, 512)
+            position_indices = self.config.position_bucket_size - 1 + position_indices
+            self.position_indices = position_indices.to(hidden_states.device)
+
+        hidden_states = self.pre_layer_norm(hidden_states)
+
+        query, key = self.in_proj_qk(hidden_states).chunk(2, dim=2)  # shape: [T, B, D]
+        value = self.in_proj_v(hidden_states)  # shape: [T, B, D]
+
+        query = query.reshape(query_len, batch_size * self.num_heads, self.head_size).transpose(0, 1)
+        key = key.reshape(key_len, batch_size * self.num_heads, self.head_size).transpose(0, 1)
+        value = value.view(key_len, batch_size * self.num_heads, self.head_size).transpose(0, 1)
+
+        attention_scores = torch.bmm(query, key.transpose(1, 2) * self.scale)
+
+        query_pos, key_pos = self.in_proj_qk(self.dropout(relative_embedding)).chunk(2, dim=-1)  # shape: [2T-1, D]
+        query_pos = query_pos.view(-1, self.num_heads, self.head_size)  # shape: [2T-1, H, D]
+        key_pos = key_pos.view(-1, self.num_heads, self.head_size)  # shape: [2T-1, H, D]
+
+        query = query.view(batch_size, self.num_heads, query_len, self.head_size)
+        key = key.view(batch_size, self.num_heads, query_len, self.head_size)
+
+        attention_c_p = torch.einsum("bhqd,khd->bhqk", query, key_pos.squeeze(1) * self.scale)
+        attention_p_c = torch.einsum("bhkd,qhd->bhqk", key * self.scale, query_pos.squeeze(1))
+
+        position_indices = self.position_indices[:query_len, :key_len].expand(batch_size, self.num_heads, -1, -1)
+        attention_c_p = attention_c_p.gather(3, position_indices)
+        attention_p_c = attention_p_c.gather(2, position_indices)
+
+        attention_scores = attention_scores.view(batch_size, self.num_heads, query_len, key_len)
+        attention_scores.add_(attention_c_p)
+        attention_scores.add_(attention_p_c)
+
+        return attention_scores, value
+
+    def compute_output(self, attention_probs, value):
+        attention_probs = self.dropout(attention_probs)
+        context = torch.bmm(attention_probs.flatten(0, 1), value)  # shape: [B*H, Q, D]
+        context = context.transpose(0, 1).reshape(context.size(1), -1, self.hidden_size)  # shape: [Q, B, H*D]
+        context = self.out_proj(context)
+        context = self.post_layer_norm(context)
+        context = self.dropout(context)
+        return context
+
+    def forward(self, hidden_states, attention_mask, relative_embedding):
+        attention_scores, value = self.compute_attention_scores(hidden_states, relative_embedding)
+        attention_probs = MaskedSoftmax.apply(attention_scores, attention_mask, -1)
+        return self.compute_output(attention_probs, value), attention_probs.detach()
+
+
+class Embedding(nn.Module):
+    def __init__(self, config):
+        super().__init__()
+        self.hidden_size = config.hidden_size
+
+        self.word_embedding = nn.Embedding(config.vocab_size, config.hidden_size)
+        self.word_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps, elementwise_affine=False)
+        self.dropout = nn.Dropout(config.hidden_dropout_prob)
+
+        self.relative_embedding = nn.Parameter(torch.empty(2 * config.position_bucket_size - 1, config.hidden_size))
+        self.relative_layer_norm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
+
+        self.initialize()
+
+    def initialize(self):
+        std = math.sqrt(2.0 / (5.0 * self.hidden_size))
+        nn.init.trunc_normal_(self.relative_embedding, mean=0.0, std=std, a=-2*std, b=2*std)
+        nn.init.trunc_normal_(self.word_embedding.weight, mean=0.0, std=std, a=-2*std, b=2*std)
+
+    def forward(self, input_ids):
+        word_embedding = self.dropout(self.word_layer_norm(self.word_embedding(input_ids)))
+        relative_embeddings = self.relative_layer_norm(self.relative_embedding)
+        return word_embedding, relative_embeddings
+
+
+#
+# HuggingFace wrappers
+#
+
+class LtgBertPreTrainedModel(PreTrainedModel):
+    """
+    An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
+    models.
+    """
+
+    config_class = LtgBertConfig
+    base_model_prefix = "bnc-bert"
+    supports_gradient_checkpointing = True
+
+    def _set_gradient_checkpointing(self, module, value=False):
+        if isinstance(module, Encoder):
+            module.activation_checkpointing = value
+
+    def _init_weights(self, _):
+        pass  # everything is already initialized
+
+
+LTG_BERT_START_DOCSTRING = r"""
+    This model inherits from [`PreTrainedModel`]. Check the superclass documentation for the generic methods the
+    library implements for all its model (such as downloading or saving, resizing the input embeddings, pruning heads
+    etc.)
+    This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass.
+    Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage
+    and behavior.
+    Parameters:
+        config ([`LtgBertConfig`]): Model configuration class with all the parameters of the model.
+            Initializing with a config file does not load the weights associated with the model, only the
+            configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights.
+"""
+
+LTG_BERT_INPUTS_DOCSTRING = r"""
+    Args:
+        input_ids (`torch.LongTensor` of shape `({0})`):
+            Indices of input sequence tokens in the vocabulary.
+            Indices can be obtained using [`AutoTokenizer`]. See [`PreTrainedTokenizer.encode`] and
+            [`PreTrainedTokenizer.__call__`] for details.
+            [What are input IDs?](../glossary#input-ids)
+        attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*):
+            Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`:
+            - 1 for tokens that are **not masked**,
+            - 0 for tokens that are **masked**.
+            [What are attention masks?](../glossary#attention-mask)
+        output_hidden_states (`bool`, *optional*):
+            Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for
+            more detail.
+        output_attentions (`bool`, *optional*):
+            Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned
+            tensors for more detail.
+        return_dict (`bool`, *optional*):
+            Whether or not to return a [`~utils.ModelOutput`] instead of a plain tuple.
+"""
+
+
+@add_start_docstrings(
+    "The bare LTG-BERT transformer outputting raw hidden-states without any specific head on top.",
+    LTG_BERT_START_DOCSTRING,
+)
+class LtgBertModel(LtgBertPreTrainedModel):
+    def __init__(self, config, add_mlm_layer=False):
+        super().__init__(config)
+        self.config = config
+
+        self.embedding = Embedding(config)
+        self.transformer = Encoder(config, activation_checkpointing=False)
+        self.classifier = MaskClassifier(config, self.embedding.word_embedding.weight) if add_mlm_layer else None
+
+    def get_input_embeddings(self):
+        return self.embedding.word_embedding
+
+    def set_input_embeddings(self, value):
+        self.embedding.word_embedding = value
+
+    def get_contextualized_embeddings(
+        self,
+        input_ids: Optional[torch.Tensor] = None,
+        inputs_embeds: Optional[torch.Tensor] = None,
+        attention_mask: Optional[torch.Tensor] = None
+    ) -> List[torch.Tensor]:
+        if input_ids is not None:
+            input_shape = input_ids.size()
+        else:
+            raise ValueError("You have to specify input_ids")
+
+        batch_size, seq_length = input_shape
+        device = input_ids.device
+
+        if attention_mask is None:
+            attention_mask = torch.zeros(batch_size, seq_length, dtype=torch.bool, device=device)
+        else:
+            attention_mask = ~attention_mask.bool()
+        attention_mask = attention_mask.unsqueeze(1).unsqueeze(2)
+ 
+        static_embeddings, relative_embedding = self.embedding(input_ids.t())
+        contextualized_embeddings, attention_probs = self.transformer(static_embeddings, attention_mask, relative_embedding)
+        contextualized_embeddings = [e.transpose(0, 1) for e in contextualized_embeddings]
+        last_layer = contextualized_embeddings[-1]
+        contextualized_embeddings = [contextualized_embeddings[0]] + [
+            contextualized_embeddings[i] - contextualized_embeddings[i - 1]
+            for i in range(1, len(contextualized_embeddings))
+        ]
+        return last_layer, contextualized_embeddings, attention_probs
+
+    @add_start_docstrings_to_model_forward(LTG_BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
+    def forward(
+        self,
+        input_ids: Optional[torch.Tensor] = None,
+        attention_mask: Optional[torch.Tensor] = None,
+        output_hidden_states: Optional[bool] = None,
+        output_attentions: Optional[bool] = None,
+        return_dict: Optional[bool] = None,
+    ) -> Union[Tuple[torch.Tensor], BaseModelOutput]:
+
+        output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
+        output_hidden_states = (
+            output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
+        )
+        return_dict = return_dict if return_dict is not None else self.config.use_return_dict
+
+        sequence_output, contextualized_embeddings, attention_probs = self.get_contextualized_embeddings(input_ids=input_ids,
+                                                                                                         attention_mask=attention_mask)
+
+        if not return_dict:
+            return (
+                sequence_output,
+                *([contextualized_embeddings] if output_hidden_states else []),
+                *([attention_probs] if output_attentions else [])
+            )
+
+        return BaseModelOutput(
+            last_hidden_state=sequence_output,
+            hidden_states=contextualized_embeddings if output_hidden_states else None,
+            attentions=attention_probs if output_attentions else None
+        )
+
+
+@add_start_docstrings("""LTG-BERT model with a `language modeling` head on top.""", LTG_BERT_START_DOCSTRING)
+class LtgBertForMaskedLM(LtgBertModel):
+    _keys_to_ignore_on_load_unexpected = ["head"]
+
+    def __init__(self, config):
+        super().__init__(config, add_mlm_layer=True)
+
+    def get_output_embeddings(self):
+        return self.classifier.nonlinearity[-1].weight
+
+    def set_output_embeddings(self, new_embeddings):
+        self.classifier.nonlinearity[-1].weight = new_embeddings
+
+    @add_start_docstrings_to_model_forward(LTG_BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
+    def forward(
+        self,
+        input_ids: Optional[torch.Tensor] = None,
+        attention_mask: Optional[torch.Tensor] = None,
+        output_hidden_states: Optional[bool] = None,
+        output_attentions: Optional[bool] = None,
+        return_dict: Optional[bool] = None,
+        labels: Optional[torch.LongTensor] = None,
+    ) -> Union[Tuple[torch.Tensor], MaskedLMOutput]:
+        r"""
+        labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
+            Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
+            config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
+            loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
+        """
+        return_dict = return_dict if return_dict is not None else self.config.use_return_dict
+
+        sequence_output, contextualized_embeddings, attention_probs = self.get_contextualized_embeddings(input_ids=input_ids,
+                                                                                                         attention_mask=attention_mask)
+        subword_prediction = self.classifier(sequence_output)
+
+        masked_lm_loss = None
+        if labels is not None:
+            masked_lm_loss = F.cross_entropy(subword_prediction.flatten(0, 1), labels.flatten())
+
+        if not return_dict:
+            output = (
+                subword_prediction,
+                *([contextualized_embeddings] if output_hidden_states else []),
+                *([attention_probs] if output_attentions else [])
+            )
+            return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
+
+        return MaskedLMOutput(
+            loss=masked_lm_loss,
+            logits=subword_prediction,
+            hidden_states=contextualized_embeddings if output_hidden_states else None,
+            attentions=attention_probs if output_attentions else None
+        )
+
+
+class Classifier(nn.Module):
+    def __init__(self, config, num_labels: int):
+        super().__init__()
+
+        drop_out = getattr(config, "classifier_dropout", config.hidden_dropout_prob)
+
+        self.nonlinearity = nn.Sequential(
+            nn.LayerNorm(config.hidden_size, config.layer_norm_eps, elementwise_affine=False),
+            nn.Linear(config.hidden_size, config.hidden_size),
+            nn.GELU(),
+            nn.LayerNorm(config.hidden_size, config.layer_norm_eps, elementwise_affine=False),
+            nn.Dropout(drop_out),
+            nn.Linear(config.hidden_size, num_labels)
+        )
+        self.initialize(config.hidden_size)
+
+    def initialize(self, hidden_size):
+        std = math.sqrt(2.0 / (5.0 * hidden_size))
+        nn.init.trunc_normal_(self.nonlinearity[1].weight, mean=0.0, std=std, a=-2*std, b=2*std)
+        nn.init.trunc_normal_(self.nonlinearity[-1].weight, mean=0.0, std=std, a=-2*std, b=2*std)
+        self.nonlinearity[1].bias.data.zero_()
+        self.nonlinearity[-1].bias.data.zero_()
+
+    def forward(self, x):
+        x = self.nonlinearity(x)
+        return x
+
+
+@add_start_docstrings(
+    """
+    LTG-BERT model with a sequence classification/regression head on top (a linear layer on top of the pooled
+    output) e.g. for GLUE tasks.
+    """,
+    LTG_BERT_START_DOCSTRING,
+)
+class LtgBertForSequenceClassification(LtgBertModel):
+    _keys_to_ignore_on_load_unexpected = ["classifier"]
+    _keys_to_ignore_on_load_missing = ["head"]
+
+    def __init__(self, config):
+        super().__init__(config, add_mlm_layer=False)
+
+        self.num_labels = config.num_labels
+        # self.head = Classifier(config, self.num_labels)
+
+        self.config = config
+
+        classifier_dropout = (
+            config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
+        )
+        self.dropout = nn.Dropout(classifier_dropout)
+        self.head = nn.Linear(config.hidden_size, config.num_labels)
+
+        # Initialize weights and apply final processing
+        self.post_init()
+
+    @add_start_docstrings_to_model_forward(LTG_BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
+    def forward(
+        self,
+        input_ids: Optional[torch.Tensor] = None,
+        attention_mask: Optional[torch.Tensor] = None,
+        output_attentions: Optional[bool] = None,
+        output_hidden_states: Optional[bool] = None,
+        inputs_embeds: Optional[torch.Tensor] = None,
+        return_dict: Optional[bool] = None,
+        labels: Optional[torch.LongTensor] = None,
+    ) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
+        r"""
+        labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
+            Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
+            config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
+            `config.num_labels > 1` a classification loss is computed (Cross-Entropy).
+        """
+        return_dict = return_dict if return_dict is not None else self.config.use_return_dict
+
+        sequence_output, contextualized_embeddings, attention_probs = self.get_contextualized_embeddings(input_ids=input_ids,
+                                                                                                         inputs_embeds=inputs_embeds,
+                                                                                                         attention_mask=attention_mask)
+        logits = self.head(sequence_output[:, 0, :])
+
+        loss = None
+        if labels is not None:
+            if self.config.problem_type is None:
+                if self.num_labels == 1:
+                    self.config.problem_type = "regression"
+                elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
+                    self.config.problem_type = "single_label_classification"
+                else:
+                    self.config.problem_type = "multi_label_classification"
+
+            if self.config.problem_type == "regression":
+                loss_fct = nn.MSELoss()
+                if self.num_labels == 1:
+                    loss = loss_fct(logits.squeeze(), labels.squeeze())
+                else:
+                    loss = loss_fct(logits, labels)
+            elif self.config.problem_type == "single_label_classification":
+                loss_fct = nn.CrossEntropyLoss()
+                loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
+            elif self.config.problem_type == "multi_label_classification":
+                loss_fct = nn.BCEWithLogitsLoss()
+                loss = loss_fct(logits, labels)
+
+        if not return_dict:
+            output = (
+                logits,
+                *([contextualized_embeddings] if output_hidden_states else []),
+                *([attention_probs] if output_attentions else [])
+            )
+            return ((loss,) + output) if loss is not None else output
+
+        return SequenceClassifierOutput(
+            loss=loss,
+            logits=logits,
+            hidden_states=contextualized_embeddings if output_hidden_states else None,
+            attentions=attention_probs if output_attentions else None
+        )
+
+
+@add_start_docstrings(
+    """
+    LTG-BERT model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
+    Named-Entity-Recognition (NER) tasks.
+    """,
+    LTG_BERT_START_DOCSTRING,
+)
+class LtgBertForTokenClassification(LtgBertModel):
+    _keys_to_ignore_on_load_unexpected = ["classifier"]
+    _keys_to_ignore_on_load_missing = ["head"]
+
+    def __init__(self, config):
+        super().__init__(config, add_mlm_layer=False)
+
+        self.num_labels = config.num_labels
+        self.head = Classifier(config, self.num_labels)
+
+    @add_start_docstrings_to_model_forward(LTG_BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
+    def forward(
+        self,
+        input_ids: Optional[torch.Tensor] = None,
+        attention_mask: Optional[torch.Tensor] = None,
+        token_type_ids: Optional[torch.Tensor] = None,
+        position_ids: Optional[torch.Tensor] = None,
+        output_attentions: Optional[bool] = None,
+        output_hidden_states: Optional[bool] = None,
+        return_dict: Optional[bool] = None,
+        labels: Optional[torch.LongTensor] = None,
+    ) -> Union[Tuple[torch.Tensor], TokenClassifierOutput]:
+        return_dict = return_dict if return_dict is not None else self.config.use_return_dict
+
+        sequence_output, contextualized_embeddings, attention_probs = self.get_contextualized_embeddings(input_ids=input_ids,
+                                                                                                         attention_mask=attention_mask)
+        logits = self.head(sequence_output)
+
+        loss = None
+        if labels is not None:
+            loss_fct = nn.CrossEntropyLoss()
+            loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
+
+        if not return_dict:
+            output = (
+                logits,
+                *([contextualized_embeddings] if output_hidden_states else []),
+                *([attention_probs] if output_attentions else [])
+            )
+            return ((loss,) + output) if loss is not None else output
+
+        return TokenClassifierOutput(
+            loss=loss,
+            logits=logits,
+            hidden_states=contextualized_embeddings if output_hidden_states else None,
+            attentions=attention_probs if output_attentions else None
+        )
+
+
+@add_start_docstrings(
+    """
+    LTG-BERT model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
+    layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
+    """,
+    LTG_BERT_START_DOCSTRING,
+)
+class LtgBertForQuestionAnswering(LtgBertModel):
+    _keys_to_ignore_on_load_unexpected = ["classifier"]
+    _keys_to_ignore_on_load_missing = ["head"]
+
+    def __init__(self, config):
+        super().__init__(config, add_mlm_layer=False)
+
+        self.num_labels = config.num_labels
+        self.head = Classifier(config, self.num_labels)
+
+    @add_start_docstrings_to_model_forward(LTG_BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
+    def forward(
+        self,
+        input_ids: Optional[torch.Tensor] = None,
+        attention_mask: Optional[torch.Tensor] = None,
+        token_type_ids: Optional[torch.Tensor] = None,
+        position_ids: Optional[torch.Tensor] = None,
+        output_attentions: Optional[bool] = None,
+        output_hidden_states: Optional[bool] = None,
+        return_dict: Optional[bool] = None,
+        start_positions: Optional[torch.Tensor] = None,
+        end_positions: Optional[torch.Tensor] = None
+    ) -> Union[Tuple[torch.Tensor], QuestionAnsweringModelOutput]:
+        return_dict = return_dict if return_dict is not None else self.config.use_return_dict
+
+        sequence_output, contextualized_embeddings, attention_probs = self.get_contextualized_embeddings(input_ids=input_ids,
+                                                                                                         attention_mask=attention_mask)
+        logits = self.head(sequence_output)
+
+        start_logits, end_logits = logits.split(1, dim=-1)
+        start_logits = start_logits.squeeze(-1).contiguous()
+        end_logits = end_logits.squeeze(-1).contiguous()
+
+        total_loss = None
+        if start_positions is not None and end_positions is not None:
+            # If we are on multi-GPU, split add a dimension
+            if len(start_positions.size()) > 1:
+                start_positions = start_positions.squeeze(-1)
+            if len(end_positions.size()) > 1:
+                end_positions = end_positions.squeeze(-1)
+
+            # sometimes the start/end positions are outside our model inputs, we ignore these terms
+            ignored_index = start_logits.size(1)
+            start_positions = start_positions.clamp(0, ignored_index)
+            end_positions = end_positions.clamp(0, ignored_index)
+
+            loss_fct = nn.CrossEntropyLoss(ignore_index=ignored_index)
+            start_loss = loss_fct(start_logits, start_positions)
+            end_loss = loss_fct(end_logits, end_positions)
+            total_loss = (start_loss + end_loss) / 2
+
+        if not return_dict:
+            output = (
+                start_logits,
+                end_logits,
+                *([contextualized_embeddings] if output_hidden_states else []),
+                *([attention_probs] if output_attentions else [])
+            )
+            return ((total_loss,) + output) if total_loss is not None else output
+
+        return QuestionAnsweringModelOutput(
+            loss=total_loss,
+            start_logits=start_logits,
+            end_logits=end_logits,
+            hidden_states=contextualized_embeddings if output_hidden_states else None,
+            attentions=attention_probs if output_attentions else None
+        )
+
+
+@add_start_docstrings(
+    """
+    LTG-BERT model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
+    softmax) e.g. for RocStories/SWAG tasks.
+    """,
+    LTG_BERT_START_DOCSTRING,
+)
+class LtgBertForMultipleChoice(LtgBertModel):
+    _keys_to_ignore_on_load_unexpected = ["classifier"]
+    _keys_to_ignore_on_load_missing = ["head"]
+
+    def __init__(self, config):
+        super().__init__(config, add_mlm_layer=False)
+
+        self.num_labels = getattr(config, "num_labels", 2)
+        self.head = Classifier(config, self.num_labels)
+
+    @add_start_docstrings_to_model_forward(LTG_BERT_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
+    def forward(
+        self,
+        input_ids: Optional[torch.Tensor] = None,
+        attention_mask: Optional[torch.Tensor] = None,
+        token_type_ids: Optional[torch.Tensor] = None,
+        position_ids: Optional[torch.Tensor] = None,
+        labels: Optional[torch.Tensor] = None,
+        output_attentions: Optional[bool] = None,
+        output_hidden_states: Optional[bool] = None,
+        return_dict: Optional[bool] = None
+    ) -> Union[Tuple[torch.Tensor], MultipleChoiceModelOutput]:
+        return_dict = return_dict if return_dict is not None else self.config.use_return_dict
+        num_choices = input_ids.shape[1]
+
+        flat_input_ids = input_ids.view(-1, input_ids.size(-1))
+        flat_attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
+
+        sequence_output, contextualized_embeddings, attention_probs = self.get_contextualized_embeddings(input_ids=flat_input_ids,
+                                                                                                         attention_mask=flat_attention_mask)
+        logits = self.head(sequence_output)
+        reshaped_logits = logits.view(-1, num_choices)
+
+        loss = None
+        if labels is not None:
+            loss_fct = nn.CrossEntropyLoss()
+            loss = loss_fct(reshaped_logits, labels)
+
+        if not return_dict:
+            output = (
+                reshaped_logits,
+                *([contextualized_embeddings] if output_hidden_states else []),
+                *([attention_probs] if output_attentions else [])
+            )
+            return ((loss,) + output) if loss is not None else output
+
+        return MultipleChoiceModelOutput(
+            loss=loss,
+            logits=reshaped_logits,
+            hidden_states=contextualized_embeddings if output_hidden_states else None,
+            attentions=attention_probs if output_attentions else None
+        )
+

pytorch_model.bin

@@ -0,0 +1,3 @@
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