# coding=utf-8 # Copyright 2023-present NAVER Corp, The Microsoft Research Asia LayoutLM Team Authors and the HuggingFace Inc. team. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License. """ PyTorch Bros model.""" import math from dataclasses import dataclass from typing import List, Optional, Tuple, Union import torch import torch.utils.checkpoint from torch import nn from torch.nn import CrossEntropyLoss from ...activations import ACT2FN from ...modeling_outputs import ( BaseModelOutputWithPastAndCrossAttentions, BaseModelOutputWithPoolingAndCrossAttentions, TokenClassifierOutput, ) from ...modeling_utils import PreTrainedModel from ...pytorch_utils import apply_chunking_to_forward, find_pruneable_heads_and_indices, prune_linear_layer from ...utils import ( ModelOutput, add_start_docstrings, add_start_docstrings_to_model_forward, logging, replace_return_docstrings, ) from .configuration_bros import BrosConfig logger = logging.get_logger(__name__) _CHECKPOINT_FOR_DOC = "jinho8345/bros-base-uncased" _CONFIG_FOR_DOC = "BrosConfig" BROS_PRETRAINED_MODEL_ARCHIVE_LIST = [ "jinho8345/bros-base-uncased", "jinho8345/bros-large-uncased", # See all Bros models at https://huggingface.co/models?filter=bros ] BROS_START_DOCSTRING = r""" This model is also a PyTorch [torch.nn.Module](https://pytorch.org/docs/stable/nn.html#torch.nn.Module) subclass. Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to general usage and behavior. Parameters: config ([`BrosConfig`]): Model configuration class with all the parameters of the model. Initializing with a config file does not load the weights associated with the model, only the configuration. Check out the [`~PreTrainedModel.from_pretrained`] method to load the model weights. """ BROS_INPUTS_DOCSTRING = r""" Args: input_ids (`torch.LongTensor` of shape `({0})`): Indices of input sequence tokens in the vocabulary. Indices can be obtained using [`BrosProcessor`]. See [`PreTrainedTokenizer.encode`] and [`PreTrainedTokenizer.__call__`] for details. [What are input IDs?](../glossary#input-ids) bbox ('torch.FloatTensor' of shape '(batch_size, num_boxes, 4)'): Bounding box coordinates for each token in the input sequence. Each bounding box is a list of four values (x1, y1, x2, y2), where (x1, y1) is the top left corner, and (x2, y2) is the bottom right corner of the bounding box. attention_mask (`torch.FloatTensor` of shape `({0})`, *optional*): Mask to avoid performing attention on padding token indices. Mask values selected in `[0, 1]`: - 1 for tokens that are **not masked**, - 0 for tokens that are **masked**. [What are attention masks?](../glossary#attention-mask) bbox_first_token_mask (`torch.FloatTensor` of shape `({0})`, *optional*): Mask to indicate the first token of each bounding box. Mask values selected in `[0, 1]`: - 1 for tokens that are **not masked**, - 0 for tokens that are **masked**. token_type_ids (`torch.LongTensor` of shape `({0})`, *optional*): Segment token indices to indicate first and second portions of the inputs. Indices are selected in `[0, 1]`: - 0 corresponds to a *sentence A* token, - 1 corresponds to a *sentence B* token. [What are token type IDs?](../glossary#token-type-ids) position_ids (`torch.LongTensor` of shape `({0})`, *optional*): Indices of positions of each input sequence tokens in the position embeddings. Selected in the range `[0, config.max_position_embeddings - 1]`. [What are position IDs?](../glossary#position-ids) head_mask (`torch.FloatTensor` of shape `(num_heads,)` or `(num_layers, num_heads)`, *optional*): Mask to nullify selected heads of the self-attention modules. Mask values selected in `[0, 1]`: - 1 indicates the head is **not masked**, - 0 indicates the head is **masked**. inputs_embeds (`torch.FloatTensor` of shape `({0}, hidden_size)`, *optional*): Optionally, instead of passing `input_ids` you can choose to directly pass an embedded representation. This is useful if you want more control over how to convert `input_ids` indices into associated vectors than the model's internal embedding lookup matrix. output_attentions (`bool`, *optional*): Whether or not to return the attentions tensors of all attention layers. See `attentions` under returned tensors for more detail. output_hidden_states (`bool`, *optional*): Whether or not to return the hidden states of all layers. See `hidden_states` under returned tensors for more detail. return_dict (`bool`, *optional*): Whether or not to return a [`~file_utils.ModelOutput`] instead of a plain tuple. """ @dataclass class BrosSpadeOutput(ModelOutput): """ Base class for outputs of token classification models. Args: loss (`torch.FloatTensor` of shape `(1,)`, *optional*, returned when `labels` is provided) : Classification loss. initial_token_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, config.num_labels)`): Classification scores for entity initial tokens (before SoftMax). subsequent_token_logits (`torch.FloatTensor` of shape `(batch_size, sequence_length, sequence_length+1)`): Classification scores for entity sequence tokens (before SoftMax). hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`): Tuple of `torch.FloatTensor` (one for the output of the embeddings, if the model has an embedding layer, + one for the output of each layer) of shape `(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer plus the optional initial embedding outputs. attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`): Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length, sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in the self-attention heads. """ loss: Optional[torch.FloatTensor] = None initial_token_logits: torch.FloatTensor = None subsequent_token_logits: torch.FloatTensor = None hidden_states: Optional[Tuple[torch.FloatTensor]] = None attentions: Optional[Tuple[torch.FloatTensor]] = None class BrosPositionalEmbedding1D(nn.Module): # Reference: https://github.com/kimiyoung/transformer-xl/blob/master/pytorch/mem_transformer.py#L15 def __init__(self, config): super(BrosPositionalEmbedding1D, self).__init__() self.dim_bbox_sinusoid_emb_1d = config.dim_bbox_sinusoid_emb_1d inv_freq = 1 / ( 10000 ** (torch.arange(0.0, self.dim_bbox_sinusoid_emb_1d, 2.0) / self.dim_bbox_sinusoid_emb_1d) ) self.register_buffer("inv_freq", inv_freq) def forward(self, pos_seq: torch.Tensor) -> torch.Tensor: seq_size = pos_seq.size() b1, b2, b3 = seq_size sinusoid_inp = pos_seq.view(b1, b2, b3, 1) * self.inv_freq.view(1, 1, 1, self.dim_bbox_sinusoid_emb_1d // 2) pos_emb = torch.cat([sinusoid_inp.sin(), sinusoid_inp.cos()], dim=-1) return pos_emb class BrosPositionalEmbedding2D(nn.Module): def __init__(self, config): super(BrosPositionalEmbedding2D, self).__init__() self.dim_bbox = config.dim_bbox self.x_pos_emb = BrosPositionalEmbedding1D(config) self.y_pos_emb = BrosPositionalEmbedding1D(config) def forward(self, bbox: torch.Tensor) -> torch.Tensor: stack = [] for i in range(self.dim_bbox): if i % 2 == 0: stack.append(self.x_pos_emb(bbox[..., i])) else: stack.append(self.y_pos_emb(bbox[..., i])) bbox_pos_emb = torch.cat(stack, dim=-1) return bbox_pos_emb class BrosBboxEmbeddings(nn.Module): def __init__(self, config): super(BrosBboxEmbeddings, self).__init__() self.bbox_sinusoid_emb = BrosPositionalEmbedding2D(config) self.bbox_projection = nn.Linear(config.dim_bbox_sinusoid_emb_2d, config.dim_bbox_projection, bias=False) def forward(self, bbox: torch.Tensor): bbox_t = bbox.transpose(0, 1) bbox_pos = bbox_t[None, :, :, :] - bbox_t[:, None, :, :] bbox_pos_emb = self.bbox_sinusoid_emb(bbox_pos) bbox_pos_emb = self.bbox_projection(bbox_pos_emb) return bbox_pos_emb class BrosTextEmbeddings(nn.Module): """Construct the embeddings from word, position and token_type embeddings.""" def __init__(self, config): super().__init__() self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id) self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size) self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size) # self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load # any TensorFlow checkpoint file self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps) self.dropout = nn.Dropout(config.hidden_dropout_prob) # position_ids (1, len position emb) is contiguous in memory and exported when serialized self.position_embedding_type = getattr(config, "position_embedding_type", "absolute") self.register_buffer("position_ids", torch.arange(config.max_position_embeddings).expand((1, -1))) self.register_buffer( "token_type_ids", torch.zeros( self.position_ids.size(), dtype=torch.long, device=self.position_ids.device, ), persistent=False, ) def forward( self, input_ids: Optional[torch.Tensor] = None, token_type_ids: Optional[torch.Tensor] = None, position_ids: Optional[torch.Tensor] = None, inputs_embeds: Optional[torch.Tensor] = None, past_key_values_length: int = 0, ) -> torch.Tensor: if input_ids is not None: input_shape = input_ids.size() else: input_shape = inputs_embeds.size()[:-1] seq_length = input_shape[1] if position_ids is None: position_ids = self.position_ids[:, past_key_values_length : seq_length + past_key_values_length] if token_type_ids is None: if hasattr(self, "token_type_ids"): buffered_token_type_ids = self.token_type_ids[:, :seq_length] buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length) token_type_ids = buffered_token_type_ids_expanded else: token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device) if inputs_embeds is None: inputs_embeds = self.word_embeddings(input_ids) token_type_embeddings = self.token_type_embeddings(token_type_ids) embeddings = inputs_embeds + token_type_embeddings if self.position_embedding_type == "absolute": position_embeddings = self.position_embeddings(position_ids) embeddings += position_embeddings embeddings = self.LayerNorm(embeddings) embeddings = self.dropout(embeddings) return embeddings class BrosSelfAttention(nn.Module): def __init__(self, config): super().__init__() if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"): raise ValueError( f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention " f"heads ({config.num_attention_heads})" ) self.num_attention_heads = config.num_attention_heads self.attention_head_size = int(config.hidden_size / config.num_attention_heads) self.all_head_size = self.num_attention_heads * self.attention_head_size self.query = nn.Linear(config.hidden_size, self.all_head_size) self.key = nn.Linear(config.hidden_size, self.all_head_size) self.value = nn.Linear(config.hidden_size, self.all_head_size) self.dropout = nn.Dropout(config.attention_probs_dropout_prob) self.position_embedding_type = getattr(config, "position_embedding_type", "absolute") if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query": self.max_position_embeddings = config.max_position_embeddings self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size) self.is_decoder = config.is_decoder def transpose_for_scores(self, x: torch.Tensor): new_x_shape = x.size()[:-1] + ( self.num_attention_heads, self.attention_head_size, ) x = x.view(*new_x_shape) return x.permute(0, 2, 1, 3) def forward( self, hidden_states: torch.Tensor, bbox_pos_emb: torch.Tensor, attention_mask: Optional[torch.Tensor] = None, head_mask: Optional[torch.Tensor] = None, encoder_hidden_states: Optional[torch.Tensor] = None, encoder_attention_mask: Optional[torch.Tensor] = None, past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None, output_attentions: Optional[torch.Tensor] = False, ) -> Tuple[torch.Tensor]: mixed_query_layer = self.query(hidden_states) # If this is instantiated as a cross-attention module, the keys # and values come from an encoder; the attention mask needs to be # such that the encoder's padding tokens are not attended to. is_cross_attention = encoder_hidden_states is not None if is_cross_attention and past_key_value is not None: # reuse k,v, cross_attentions key_layer = past_key_value[0] value_layer = past_key_value[1] attention_mask = encoder_attention_mask elif is_cross_attention: key_layer = self.transpose_for_scores(self.key(encoder_hidden_states)) value_layer = self.transpose_for_scores(self.value(encoder_hidden_states)) attention_mask = encoder_attention_mask elif past_key_value is not None: key_layer = self.transpose_for_scores(self.key(hidden_states)) value_layer = self.transpose_for_scores(self.value(hidden_states)) key_layer = torch.cat([past_key_value[0], key_layer], dim=2) value_layer = torch.cat([past_key_value[1], value_layer], dim=2) else: key_layer = self.transpose_for_scores(self.key(hidden_states)) value_layer = self.transpose_for_scores(self.value(hidden_states)) query_layer = self.transpose_for_scores(mixed_query_layer) if self.is_decoder: # if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states. # Further calls to cross_attention layer can then reuse all cross-attention # key/value_states (first "if" case) # if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of # all previous decoder key/value_states. Further calls to uni-directional self-attention # can concat previous decoder key/value_states to current projected key/value_states (third "elif" case) # if encoder bi-directional self-attention `past_key_value` is always `None` past_key_value = (key_layer, value_layer) # Take the dot product between "query" and "key" to get the raw attention scores. attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2)) if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query": seq_length = hidden_states.size()[1] position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1) position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1) distance = position_ids_l - position_ids_r positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1) positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility if self.position_embedding_type == "relative_key": relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding) attention_scores = attention_scores + relative_position_scores elif self.position_embedding_type == "relative_key_query": relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding) relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding) attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key # bbox positional encoding batch_size, n_head, seq_length, d_head = query_layer.shape bbox_pos_emb = bbox_pos_emb.view(seq_length, seq_length, batch_size, d_head) bbox_pos_emb = bbox_pos_emb.permute([2, 0, 1, 3]) bbox_pos_scores = torch.einsum("bnid,bijd->bnij", (query_layer, bbox_pos_emb)) attention_scores = attention_scores + bbox_pos_scores attention_scores = attention_scores / math.sqrt(self.attention_head_size) if attention_mask is not None: # Apply the attention mask is (precomputed for all layers in BrosModel forward() function) attention_scores = attention_scores + attention_mask # Normalize the attention scores to probabilities. attention_probs = nn.Softmax(dim=-1)(attention_scores) # This is actually dropping out entire tokens to attend to, which might # seem a bit unusual, but is taken from the original Transformer paper. attention_probs = self.dropout(attention_probs) # Mask heads if we want to if head_mask is not None: attention_probs = attention_probs * head_mask context_layer = torch.matmul(attention_probs, value_layer) context_layer = context_layer.permute(0, 2, 1, 3).contiguous() new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,) context_layer = context_layer.view(*new_context_layer_shape) outputs = (context_layer, attention_probs) if output_attentions else (context_layer,) if self.is_decoder: outputs = outputs + (past_key_value,) return outputs # Copied from transformers.models.bert.modeling_bert.BertSelfOutput with Bert->Bros class BrosSelfOutput(nn.Module): def __init__(self, config): super().__init__() self.dense = nn.Linear(config.hidden_size, config.hidden_size) self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps) self.dropout = nn.Dropout(config.hidden_dropout_prob) def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor: hidden_states = self.dense(hidden_states) hidden_states = self.dropout(hidden_states) hidden_states = self.LayerNorm(hidden_states + input_tensor) return hidden_states class BrosAttention(nn.Module): def __init__(self, config): super().__init__() self.self = BrosSelfAttention(config) self.output = BrosSelfOutput(config) self.pruned_heads = set() def prune_heads(self, heads): if len(heads) == 0: return heads, index = find_pruneable_heads_and_indices( heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads, ) # Prune linear layers self.self.query = prune_linear_layer(self.self.query, index) self.self.key = prune_linear_layer(self.self.key, index) self.self.value = prune_linear_layer(self.self.value, index) self.output.dense = prune_linear_layer(self.output.dense, index, dim=1) # Update hyper params and store pruned heads self.self.num_attention_heads = self.self.num_attention_heads - len(heads) self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads self.pruned_heads = self.pruned_heads.union(heads) def forward( self, hidden_states: torch.Tensor, bbox_pos_emb: torch.Tensor, attention_mask: Optional[torch.Tensor] = None, head_mask: Optional[torch.Tensor] = None, encoder_hidden_states: Optional[torch.Tensor] = None, encoder_attention_mask: Optional[torch.Tensor] = None, past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None, output_attentions: Optional[bool] = False, ) -> Tuple[torch.Tensor]: self_outputs = self.self( hidden_states=hidden_states, bbox_pos_emb=bbox_pos_emb, attention_mask=attention_mask, head_mask=head_mask, encoder_hidden_states=encoder_hidden_states, encoder_attention_mask=encoder_attention_mask, past_key_value=past_key_value, output_attentions=output_attentions, ) attention_output = self.output(self_outputs[0], hidden_states) outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them return outputs # Copied from transformers.models.bert.modeling_bert.BertIntermediate with Bert->Bros class BrosIntermediate(nn.Module): def __init__(self, config): super().__init__() self.dense = nn.Linear(config.hidden_size, config.intermediate_size) if isinstance(config.hidden_act, str): self.intermediate_act_fn = ACT2FN[config.hidden_act] else: self.intermediate_act_fn = config.hidden_act def forward(self, hidden_states: torch.Tensor) -> torch.Tensor: hidden_states = self.dense(hidden_states) hidden_states = self.intermediate_act_fn(hidden_states) return hidden_states class BrosOutput(nn.Module): def __init__(self, config): super().__init__() self.dense = nn.Linear(config.intermediate_size, config.hidden_size) self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps) self.dropout = nn.Dropout(config.hidden_dropout_prob) def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor) -> torch.Tensor: hidden_states = self.dense(hidden_states) hidden_states = self.dropout(hidden_states) hidden_states = self.LayerNorm(hidden_states + input_tensor) return hidden_states class BrosLayer(nn.Module): def __init__(self, config): super().__init__() self.chunk_size_feed_forward = config.chunk_size_feed_forward self.seq_len_dim = 1 self.attention = BrosAttention(config) self.is_decoder = config.is_decoder self.add_cross_attention = config.add_cross_attention if self.add_cross_attention: if not self.is_decoder: raise Exception(f"{self} should be used as a decoder model if cross attention is added") self.crossattention = BrosAttention(config) self.intermediate = BrosIntermediate(config) self.output = BrosOutput(config) def forward( self, hidden_states: torch.Tensor, bbox_pos_emb: torch.Tensor, attention_mask: Optional[torch.FloatTensor] = None, head_mask: Optional[torch.FloatTensor] = None, encoder_hidden_states: Optional[torch.FloatTensor] = None, encoder_attention_mask: Optional[torch.FloatTensor] = None, past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None, output_attentions: Optional[bool] = False, ) -> Tuple[torch.Tensor]: # decoder uni-directional self-attention cached key/values tuple is at positions 1,2 self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None self_attention_outputs = self.attention( hidden_states, bbox_pos_emb=bbox_pos_emb, attention_mask=attention_mask, head_mask=head_mask, output_attentions=output_attentions, past_key_value=self_attn_past_key_value, ) attention_output = self_attention_outputs[0] # if decoder, the last output is tuple of self-attn cache if self.is_decoder: outputs = self_attention_outputs[1:-1] present_key_value = self_attention_outputs[-1] else: outputs = self_attention_outputs[1:] # add self attentions if we output attention weights cross_attn_present_key_value = None if self.is_decoder and encoder_hidden_states is not None: if hasattr(self, "crossattention"): raise Exception( f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers by setting `config.add_cross_attention=True`" ) # cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None cross_attention_outputs = self.crossattention( attention_output, attention_mask, head_mask, encoder_hidden_states, encoder_attention_mask, cross_attn_past_key_value, output_attentions, ) attention_output = cross_attention_outputs[0] outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights # add cross-attn cache to positions 3,4 of present_key_value tuple cross_attn_present_key_value = cross_attention_outputs[-1] present_key_value = present_key_value + cross_attn_present_key_value layer_output = apply_chunking_to_forward( self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output, ) outputs = (layer_output,) + outputs # if decoder, return the attn key/values as the last output if self.is_decoder: outputs = outputs + (present_key_value,) return outputs def feed_forward_chunk(self, attention_output): intermediate_output = self.intermediate(attention_output) layer_output = self.output(intermediate_output, attention_output) return layer_output class BrosEncoder(nn.Module): def __init__(self, config): super().__init__() self.config = config self.layer = nn.ModuleList([BrosLayer(config) for _ in range(config.num_hidden_layers)]) def forward( self, hidden_states: torch.Tensor, bbox_pos_emb: torch.Tensor, attention_mask: Optional[torch.FloatTensor] = None, head_mask: Optional[torch.FloatTensor] = None, encoder_hidden_states: Optional[torch.FloatTensor] = None, encoder_attention_mask: Optional[torch.FloatTensor] = None, past_key_values: Optional[Tuple[Tuple[torch.FloatTensor]]] = None, use_cache: Optional[bool] = None, output_attentions: Optional[bool] = False, output_hidden_states: Optional[bool] = False, return_dict: Optional[bool] = True, ) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPastAndCrossAttentions]: all_hidden_states = () if output_hidden_states else None all_self_attentions = () if output_attentions else None all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None next_decoder_cache = () if use_cache else None for i, layer_module in enumerate(self.layer): if output_hidden_states: all_hidden_states = all_hidden_states + (hidden_states,) layer_head_mask = head_mask[i] if head_mask is not None else None past_key_value = past_key_values[i] if past_key_values is not None else None if getattr(self.config, "gradient_checkpointing", False) and self.training: if use_cache: logger.warning( "`use_cache=True` is incompatible with `config.gradient_checkpointing=True`. Setting " "`use_cache=False`..." ) use_cache = False def create_custom_forward(module): def custom_forward(*inputs): return module(*inputs, output_attentions) return custom_forward layer_outputs = torch.utils.checkpoint.checkpoint( create_custom_forward(layer_module), hidden_states, bbox_pos_emb, attention_mask, layer_head_mask, encoder_hidden_states, encoder_attention_mask, ) else: layer_outputs = layer_module( hidden_states=hidden_states, bbox_pos_emb=bbox_pos_emb, attention_mask=attention_mask, head_mask=layer_head_mask, encoder_hidden_states=encoder_hidden_states, encoder_attention_mask=encoder_attention_mask, past_key_value=past_key_value, output_attentions=output_attentions, ) hidden_states = layer_outputs[0] if use_cache: next_decoder_cache += (layer_outputs[-1],) if output_attentions: all_self_attentions = all_self_attentions + (layer_outputs[1],) if self.config.add_cross_attention: all_cross_attentions = all_cross_attentions + (layer_outputs[2],) if output_hidden_states: all_hidden_states = all_hidden_states + (hidden_states,) if not return_dict: return tuple( v for v in [ hidden_states, next_decoder_cache, all_hidden_states, all_self_attentions, all_cross_attentions, ] if v is not None ) return BaseModelOutputWithPastAndCrossAttentions( last_hidden_state=hidden_states, past_key_values=next_decoder_cache, hidden_states=all_hidden_states, attentions=all_self_attentions, cross_attentions=all_cross_attentions, ) # Copied from transformers.models.bert.modeling_bert.BertPooler with Bert->Bros class BrosPooler(nn.Module): def __init__(self, config): super().__init__() self.dense = nn.Linear(config.hidden_size, config.hidden_size) self.activation = nn.Tanh() def forward(self, hidden_states: torch.Tensor) -> torch.Tensor: # We "pool" the model by simply taking the hidden state corresponding # to the first token. first_token_tensor = hidden_states[:, 0] pooled_output = self.dense(first_token_tensor) pooled_output = self.activation(pooled_output) return pooled_output class BrosRelationExtractor(nn.Module): def __init__(self, config): super().__init__() self.n_relations = config.n_relations self.backbone_hidden_size = config.hidden_size self.head_hidden_size = config.hidden_size self.classifier_dropout_prob = config.classifier_dropout_prob self.drop = nn.Dropout(self.classifier_dropout_prob) self.query = nn.Linear(self.backbone_hidden_size, self.n_relations * self.head_hidden_size) self.key = nn.Linear(self.backbone_hidden_size, self.n_relations * self.head_hidden_size) self.dummy_node = nn.Parameter(torch.zeros(1, self.backbone_hidden_size)) def forward(self, query_layer: torch.Tensor, key_layer: torch.Tensor): query_layer = self.query(self.drop(query_layer)) dummy_vec = self.dummy_node.unsqueeze(0).repeat(1, key_layer.size(1), 1) key_layer = torch.cat([key_layer, dummy_vec], axis=0) key_layer = self.key(self.drop(key_layer)) query_layer = query_layer.view( query_layer.size(0), query_layer.size(1), self.n_relations, self.head_hidden_size ) key_layer = key_layer.view(key_layer.size(0), key_layer.size(1), self.n_relations, self.head_hidden_size) relation_score = torch.matmul( query_layer.permute(2, 1, 0, 3), key_layer.permute(2, 1, 3, 0) ) # equivalent to torch.einsum("ibnd,jbnd->nbij", (query_layer, key_layer)) return relation_score class BrosPreTrainedModel(PreTrainedModel): """ An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained models. """ config_class = BrosConfig base_model_prefix = "bros" def _init_weights(self, module): """Initialize the weights""" if isinstance(module, nn.Linear): # Slightly different from the TF version which uses truncated_normal for initialization # cf https://github.com/pytorch/pytorch/pull/5617 module.weight.data.normal_(mean=0.0, std=self.config.initializer_range) if module.bias is not None: module.bias.data.zero_() elif isinstance(module, nn.Embedding): module.weight.data.normal_(mean=0.0, std=self.config.initializer_range) if module.padding_idx is not None: module.weight.data[module.padding_idx].zero_() elif isinstance(module, nn.LayerNorm): module.bias.data.zero_() module.weight.data.fill_(1.0) @add_start_docstrings( "The bare Bros Model transformer outputting raw hidden-states without any specific head on top.", BROS_START_DOCSTRING, ) class BrosModel(BrosPreTrainedModel): def __init__(self, config, add_pooling_layer=True): super().__init__(config) self.config = config self.embeddings = BrosTextEmbeddings(config) self.bbox_embeddings = BrosBboxEmbeddings(config) self.encoder = BrosEncoder(config) self.pooler = BrosPooler(config) if add_pooling_layer else None self.init_weights() def get_input_embeddings(self): return self.embeddings.word_embeddings def set_input_embeddings(self, value): self.embeddings.word_embeddings = value def _prune_heads(self, heads_to_prune): """ Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base class PreTrainedModel """ for layer, heads in heads_to_prune.items(): self.encoder.layer[layer].attention.prune_heads(heads) @add_start_docstrings_to_model_forward(BROS_INPUTS_DOCSTRING.format("batch_size, sequence_length")) @replace_return_docstrings(output_type=BaseModelOutputWithPoolingAndCrossAttentions, config_class=_CONFIG_FOR_DOC) def forward( self, input_ids: Optional[torch.Tensor] = None, bbox: Optional[torch.Tensor] = None, attention_mask: Optional[torch.Tensor] = None, token_type_ids: Optional[torch.Tensor] = None, position_ids: Optional[torch.Tensor] = None, head_mask: Optional[torch.Tensor] = None, inputs_embeds: Optional[torch.Tensor] = None, encoder_hidden_states: Optional[torch.Tensor] = None, encoder_attention_mask: Optional[torch.Tensor] = None, past_key_values: Optional[List[torch.FloatTensor]] = None, use_cache: Optional[bool] = None, output_attentions: Optional[bool] = None, output_hidden_states: Optional[bool] = None, return_dict: Optional[bool] = None, ) -> Union[Tuple[torch.Tensor], BaseModelOutputWithPoolingAndCrossAttentions]: r""" Returns: Examples: ```python >>> import torch >>> from transformers import BrosProcessor, BrosModel >>> processor = BrosProcessor.from_pretrained("jinho8345/bros-base-uncased") >>> model = BrosModel.from_pretrained("jinho8345/bros-base-uncased") >>> encoding = processor("Hello, my dog is cute", add_special_tokens=False, return_tensors="pt") >>> bbox = torch.tensor([[[0, 0, 1, 1]]]).repeat(1, encoding["input_ids"].shape[-1], 1) >>> encoding["bbox"] = bbox >>> outputs = model(**encoding) >>> last_hidden_states = outputs.last_hidden_state ```""" output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions output_hidden_states = ( output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states ) return_dict = return_dict if return_dict is not None else self.config.use_return_dict if self.config.is_decoder: use_cache = use_cache if use_cache is not None else self.config.use_cache else: use_cache = False if input_ids is not None and inputs_embeds is not None: raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time") elif input_ids is not None: input_shape = input_ids.size() elif inputs_embeds is not None: input_shape = inputs_embeds.size()[:-1] else: raise ValueError("You have to specify either input_ids or inputs_embeds") if bbox is None: raise ValueError("You have to specify bbox") batch_size, seq_length = input_shape device = input_ids.device if input_ids is not None else inputs_embeds.device # past_key_values_length past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0 if attention_mask is None: attention_mask = torch.ones(input_shape, device=device) if token_type_ids is None: if hasattr(self.embeddings, "token_type_ids"): buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length] buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length) token_type_ids = buffered_token_type_ids_expanded else: token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device) # We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length] # ourselves in which case we just need to make it broadcastable to all heads. extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape, device) # If a 2D or 3D attention mask is provided for the cross-attention # we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length] if self.config.is_decoder and encoder_hidden_states is not None: encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size() encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length) if encoder_attention_mask is None: encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device) encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask) else: encoder_extended_attention_mask = None # Prepare head mask if needed # 1.0 in head_mask indicate we keep the head # attention_probs has shape bsz x n_heads x N x N # input head_mask has shape [num_heads] or [num_hidden_layers x num_heads] # and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length] head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers) embedding_output = self.embeddings( input_ids=input_ids, position_ids=position_ids, token_type_ids=token_type_ids, inputs_embeds=inputs_embeds, past_key_values_length=past_key_values_length, ) # if bbox has 2 points (4 float tensors) per token, convert it to 4 points (8 float tensors) per token if bbox.shape[-1] == 4: bbox = bbox[:, :, [0, 1, 2, 1, 2, 3, 0, 3]] scaled_bbox = bbox * self.config.bbox_scale bbox_position_embeddings = self.bbox_embeddings(scaled_bbox) encoder_outputs = self.encoder( embedding_output, bbox_pos_emb=bbox_position_embeddings, attention_mask=extended_attention_mask, head_mask=head_mask, encoder_hidden_states=encoder_hidden_states, encoder_attention_mask=encoder_extended_attention_mask, past_key_values=past_key_values, use_cache=use_cache, output_attentions=output_attentions, output_hidden_states=output_hidden_states, return_dict=return_dict, ) sequence_output = encoder_outputs[0] pooled_output = self.pooler(sequence_output) if self.pooler is not None else None if not return_dict: return (sequence_output, pooled_output) + encoder_outputs[1:] return BaseModelOutputWithPoolingAndCrossAttentions( last_hidden_state=sequence_output, pooler_output=pooled_output, past_key_values=encoder_outputs.past_key_values, hidden_states=encoder_outputs.hidden_states, attentions=encoder_outputs.attentions, cross_attentions=encoder_outputs.cross_attentions, ) @add_start_docstrings( """ Bros Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for Named-Entity-Recognition (NER) tasks. """, BROS_START_DOCSTRING, ) class BrosForTokenClassification(BrosPreTrainedModel): _keys_to_ignore_on_load_unexpected = [r"pooler"] def __init__(self, config): super().__init__(config) self.num_labels = config.num_labels self.bros = BrosModel(config) classifier_dropout = ( config.classifier_dropout if hasattr(config, "classifier_dropout") else config.hidden_dropout_prob ) self.dropout = nn.Dropout(classifier_dropout) self.classifier = nn.Linear(config.hidden_size, config.num_labels) self.init_weights() @add_start_docstrings_to_model_forward(BROS_INPUTS_DOCSTRING.format("batch_size, sequence_length")) @replace_return_docstrings(output_type=TokenClassifierOutput, config_class=_CONFIG_FOR_DOC) def forward( self, input_ids: Optional[torch.Tensor] = None, bbox: Optional[torch.Tensor] = None, attention_mask: Optional[torch.Tensor] = None, bbox_first_token_mask: Optional[torch.Tensor] = None, token_type_ids: Optional[torch.Tensor] = None, position_ids: Optional[torch.Tensor] = None, head_mask: Optional[torch.Tensor] = None, inputs_embeds: Optional[torch.Tensor] = None, labels: Optional[torch.Tensor] = None, output_attentions: Optional[bool] = None, output_hidden_states: Optional[bool] = None, return_dict: Optional[bool] = None, ) -> Union[Tuple[torch.Tensor], TokenClassifierOutput]: r""" Returns: Examples: ```python >>> import torch >>> from transformers import BrosProcessor, BrosForTokenClassification >>> processor = BrosProcessor.from_pretrained("jinho8345/bros-base-uncased") >>> model = BrosForTokenClassification.from_pretrained("jinho8345/bros-base-uncased") >>> encoding = processor("Hello, my dog is cute", add_special_tokens=False, return_tensors="pt") >>> bbox = torch.tensor([[[0, 0, 1, 1]]]).repeat(1, encoding["input_ids"].shape[-1], 1) >>> encoding["bbox"] = bbox >>> outputs = model(**encoding) ```""" return_dict = return_dict if return_dict is not None else self.config.use_return_dict outputs = self.bros( input_ids, bbox=bbox, attention_mask=attention_mask, token_type_ids=token_type_ids, position_ids=position_ids, head_mask=head_mask, inputs_embeds=inputs_embeds, output_attentions=output_attentions, output_hidden_states=output_hidden_states, return_dict=return_dict, ) sequence_output = outputs[0] sequence_output = self.dropout(sequence_output) logits = self.classifier(sequence_output) loss = None if labels is not None: loss_fct = CrossEntropyLoss() if bbox_first_token_mask is not None: bbox_first_token_mask = bbox_first_token_mask.view(-1) loss = loss_fct( logits.view(-1, self.num_labels)[bbox_first_token_mask], labels.view(-1)[bbox_first_token_mask] ) else: loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1)) if not return_dict: output = (logits,) + outputs[2:] return ((loss,) + output) if loss is not None else output return TokenClassifierOutput( loss=loss, logits=logits, hidden_states=outputs.hidden_states, attentions=outputs.attentions, ) @add_start_docstrings( """ Bros Model with a token classification head on top (initial_token_layers and subsequent_token_layer on top of the hidden-states output) e.g. for Named-Entity-Recognition (NER) tasks. The initial_token_classifier is used to predict the first token of each entity, and the subsequent_token_classifier is used to predict the subsequent tokens within an entity. Compared to BrosForTokenClassification, this model is more robust to serialization errors since it predicts next token from one token. """, BROS_START_DOCSTRING, ) class BrosSpadeEEForTokenClassification(BrosPreTrainedModel): _keys_to_ignore_on_load_unexpected = [r"pooler"] def __init__(self, config): super().__init__(config) self.config = config self.num_labels = config.num_labels self.n_relations = config.n_relations self.backbone_hidden_size = config.hidden_size self.bros = BrosModel(config) classifier_dropout = ( config.classifier_dropout if hasattr(config, "classifier_dropout") else config.hidden_dropout_prob ) # Initial token classification for Entity Extraction (NER) self.initial_token_classifier = nn.Sequential( nn.Dropout(classifier_dropout), nn.Linear(config.hidden_size, config.hidden_size), nn.Dropout(classifier_dropout), nn.Linear(config.hidden_size, config.num_labels), ) # Subsequent token classification for Entity Extraction (NER) self.subsequent_token_classifier = BrosRelationExtractor(config) self.init_weights() @add_start_docstrings_to_model_forward(BROS_INPUTS_DOCSTRING.format("batch_size, sequence_length")) @replace_return_docstrings(output_type=BrosSpadeOutput, config_class=_CONFIG_FOR_DOC) def forward( self, input_ids: Optional[torch.Tensor] = None, bbox: Optional[torch.Tensor] = None, attention_mask: Optional[torch.Tensor] = None, bbox_first_token_mask: Optional[torch.Tensor] = None, token_type_ids: Optional[torch.Tensor] = None, position_ids: Optional[torch.Tensor] = None, head_mask: Optional[torch.Tensor] = None, inputs_embeds: Optional[torch.Tensor] = None, initial_token_labels: Optional[torch.Tensor] = None, subsequent_token_labels: Optional[torch.Tensor] = None, output_attentions: Optional[bool] = None, output_hidden_states: Optional[bool] = None, return_dict: Optional[bool] = None, ) -> Union[Tuple[torch.Tensor], BrosSpadeOutput]: r""" Returns: Examples: ```python >>> import torch >>> from transformers import BrosProcessor, BrosSpadeEEForTokenClassification >>> processor = BrosProcessor.from_pretrained("jinho8345/bros-base-uncased") >>> model = BrosSpadeEEForTokenClassification.from_pretrained("jinho8345/bros-base-uncased") >>> encoding = processor("Hello, my dog is cute", add_special_tokens=False, return_tensors="pt") >>> bbox = torch.tensor([[[0, 0, 1, 1]]]).repeat(1, encoding["input_ids"].shape[-1], 1) >>> encoding["bbox"] = bbox >>> outputs = model(**encoding) ```""" return_dict = return_dict if return_dict is not None else self.config.use_return_dict outputs = self.bros( input_ids=input_ids, bbox=bbox, attention_mask=attention_mask, token_type_ids=token_type_ids, position_ids=position_ids, head_mask=head_mask, inputs_embeds=inputs_embeds, output_attentions=output_attentions, output_hidden_states=output_hidden_states, return_dict=return_dict, ) last_hidden_states = outputs[0] last_hidden_states = last_hidden_states.transpose(0, 1).contiguous() initial_token_logits = self.initial_token_classifier(last_hidden_states).transpose(0, 1).contiguous() subsequent_token_logits = self.subsequent_token_classifier(last_hidden_states, last_hidden_states).squeeze(0) # make subsequent token (sequence token classification) mask inv_attention_mask = 1 - attention_mask batch_size, max_seq_length = inv_attention_mask.shape device = inv_attention_mask.device invalid_token_mask = torch.cat([inv_attention_mask, torch.zeros([batch_size, 1]).to(device)], axis=1).bool() subsequent_token_logits = subsequent_token_logits.masked_fill( invalid_token_mask[:, None, :], torch.finfo(subsequent_token_logits.dtype).min ) self_token_mask = torch.eye(max_seq_length, max_seq_length + 1).to(device).bool() subsequent_token_logits = subsequent_token_logits.masked_fill( self_token_mask[None, :, :], torch.finfo(subsequent_token_logits.dtype).min ) subsequent_token_mask = attention_mask.view(-1).bool() loss = None if initial_token_labels is not None and subsequent_token_labels is not None: loss_fct = CrossEntropyLoss() # get initial token loss initial_token_labels = initial_token_labels.view(-1) if bbox_first_token_mask is not None: bbox_first_token_mask = bbox_first_token_mask.view(-1) initial_token_loss = loss_fct( initial_token_logits.view(-1, self.num_labels)[bbox_first_token_mask], initial_token_labels[bbox_first_token_mask], ) else: initial_token_loss = loss_fct(initial_token_logits.view(-1, self.num_labels), initial_token_labels) subsequent_token_labels = subsequent_token_labels.view(-1) subsequent_token_loss = loss_fct( subsequent_token_logits.view(-1, max_seq_length + 1)[subsequent_token_mask], subsequent_token_labels[subsequent_token_mask], ) loss = initial_token_loss + subsequent_token_loss if not return_dict: output = (initial_token_logits, subsequent_token_logits) + outputs[2:] return ((loss,) + output) if loss is not None else output return BrosSpadeOutput( loss=loss, initial_token_logits=initial_token_logits, subsequent_token_logits=subsequent_token_logits, hidden_states=outputs.hidden_states, attentions=outputs.attentions, ) @add_start_docstrings( """ Bros Model with a token classification head on top (a entity_linker layer on top of the hidden-states output) e.g. for Entity-Linking. The entity_linker is used to predict intra-entity links (one entity to another entity). """, BROS_START_DOCSTRING, ) class BrosSpadeELForTokenClassification(BrosPreTrainedModel): _keys_to_ignore_on_load_unexpected = [r"pooler"] def __init__(self, config): super().__init__(config) self.config = config self.num_labels = config.num_labels self.n_relations = config.n_relations self.backbone_hidden_size = config.hidden_size self.bros = BrosModel(config) (config.classifier_dropout if hasattr(config, "classifier_dropout") else config.hidden_dropout_prob) self.entity_linker = BrosRelationExtractor(config) self.init_weights() @add_start_docstrings_to_model_forward(BROS_INPUTS_DOCSTRING.format("batch_size, sequence_length")) @replace_return_docstrings(output_type=TokenClassifierOutput, config_class=_CONFIG_FOR_DOC) def forward( self, input_ids: Optional[torch.Tensor] = None, bbox: Optional[torch.Tensor] = None, attention_mask: Optional[torch.Tensor] = None, bbox_first_token_mask: Optional[torch.Tensor] = None, token_type_ids: Optional[torch.Tensor] = None, position_ids: Optional[torch.Tensor] = None, head_mask: Optional[torch.Tensor] = None, inputs_embeds: Optional[torch.Tensor] = None, labels: Optional[torch.Tensor] = None, output_attentions: Optional[bool] = None, output_hidden_states: Optional[bool] = None, return_dict: Optional[bool] = None, ) -> Union[Tuple[torch.Tensor], TokenClassifierOutput]: r""" Returns: Examples: ```python >>> import torch >>> from transformers import BrosProcessor, BrosSpadeELForTokenClassification >>> processor = BrosProcessor.from_pretrained("jinho8345/bros-base-uncased") >>> model = BrosSpadeELForTokenClassification.from_pretrained("jinho8345/bros-base-uncased") >>> encoding = processor("Hello, my dog is cute", add_special_tokens=False, return_tensors="pt") >>> bbox = torch.tensor([[[0, 0, 1, 1]]]).repeat(1, encoding["input_ids"].shape[-1], 1) >>> encoding["bbox"] = bbox >>> outputs = model(**encoding) ```""" return_dict = return_dict if return_dict is not None else self.config.use_return_dict outputs = self.bros( input_ids=input_ids, bbox=bbox, attention_mask=attention_mask, token_type_ids=token_type_ids, position_ids=position_ids, head_mask=head_mask, inputs_embeds=inputs_embeds, output_attentions=output_attentions, output_hidden_states=output_hidden_states, return_dict=return_dict, ) last_hidden_states = outputs[0] last_hidden_states = last_hidden_states.transpose(0, 1).contiguous() logits = self.entity_linker(last_hidden_states, last_hidden_states).squeeze(0) loss = None if labels is not None: loss_fct = CrossEntropyLoss() batch_size, max_seq_length = attention_mask.shape device = attention_mask.device self_token_mask = torch.eye(max_seq_length, max_seq_length + 1).to(device).bool() mask = bbox_first_token_mask.view(-1) bbox_first_token_mask = torch.cat( [ ~bbox_first_token_mask, torch.zeros([batch_size, 1], dtype=torch.bool).to(device), ], axis=1, ) logits = logits.masked_fill(bbox_first_token_mask[:, None, :], torch.finfo(logits.dtype).min) logits = logits.masked_fill(self_token_mask[None, :, :], torch.finfo(logits.dtype).min) loss = loss_fct(logits.view(-1, max_seq_length + 1)[mask], labels.view(-1)[mask]) if not return_dict: output = (logits,) + outputs[2:] return ((loss,) + output) if loss is not None else output return TokenClassifierOutput( loss=loss, logits=logits, hidden_states=outputs.hidden_states, attentions=outputs.attentions, )