Update multi-model-plant-genome-corpus.py

multi-model-plant-genome-corpus.py

@@ -77,10 +77,13 @@ class PlantMultiSpeciesGenomes(datasets.GeneratorBasedBuilder):
         )
     
     def _split_generators(self, dl_manager: datasets.DownloadManager) -> List[datasets.SplitGenerator]:
-        # Get the list of genome files in the plant_genomes directory
-        genome_dir = "plant_genomes"
-        genome_files = [os.path.join(genome_dir, f) for f in os.listdir(genome_dir) if f.endswith(".fna.gz")]
-        
+        filepaths_txt = dl_manager.download('plant_genome_file_names.txt')
+    
+        with open(filepaths_txt, 'r') as f:
+            filepaths = [os.path.join("plant_genomes", filepath.rstrip()) for filepath in f]
+    
+        genome_files = dl_manager.download_and_extract(filepaths)
+    
         return [
             datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"files": genome_files, "chunk_length": self.config.chunk_length})
         ]