Training in progress, epoch 1

config.json

@@ -0,0 +1,33 @@
+{
+  "_name_or_path": "Rostlab/prot_bert",
+  "architectures": [
+    "CustomBertForSequenceClassification"
+  ],
+  "attention_probs_dropout_prob": 0.0,
+  "classifier_dropout": null,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.0,
+  "hidden_size": 1024,
+  "id2label": {
+    "0": "non-toxic",
+    "1": "toxic"
+  },
+  "initializer_range": 0.02,
+  "intermediate_size": 4096,
+  "label2id": {
+    "non-toxic": 0,
+    "toxic": 1
+  },
+  "layer_norm_eps": 1e-12,
+  "max_position_embeddings": 40000,
+  "model_type": "bert",
+  "num_attention_heads": 16,
+  "num_hidden_layers": 30,
+  "pad_token_id": 0,
+  "position_embedding_type": "absolute",
+  "torch_dtype": "float32",
+  "transformers_version": "4.41.2",
+  "type_vocab_size": 2,
+  "use_cache": true,
+  "vocab_size": 30
+}

model.safetensors

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+version https://git-lfs.github.com/spec/v1
+oid sha256:c42a7ac276dc24ba1d9e0157defa3578a262eba881f9d55ce7c39a516cb127d4
+size 1686085368

special_tokens_map.json

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+{
+  "cls_token": "[CLS]",
+  "mask_token": "[MASK]",
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "unk_token": "[UNK]"
+}

tokenizer.json

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+{
+  "version": "1.0",
+  "truncation": null,
+  "padding": null,
+  "added_tokens": [
+    {
+      "id": 0,
+      "content": "[PAD]",
+      "single_word": false,
+      "lstrip": false,
+      "rstrip": false,
+      "normalized": false,
+      "special": true
+    },
+    {
+      "id": 1,
+      "content": "[UNK]",
+      "single_word": false,
+      "lstrip": false,
+      "rstrip": false,
+      "normalized": false,
+      "special": true
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+    {
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+      "content": "[CLS]",
+      "single_word": false,
+      "lstrip": false,
+      "rstrip": false,
+      "normalized": false,
+      "special": true
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+    {
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+      "content": "[SEP]",
+      "single_word": false,
+      "lstrip": false,
+      "rstrip": false,
+      "normalized": false,
+      "special": true
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+    {
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+      "content": "[MASK]",
+      "single_word": false,
+      "lstrip": false,
+      "rstrip": false,
+      "normalized": false,
+      "special": true
+    }
+  ],
+  "normalizer": {
+    "type": "BertNormalizer",
+    "clean_text": true,
+    "handle_chinese_chars": true,
+    "strip_accents": null,
+    "lowercase": false
+  },
+  "pre_tokenizer": {
+    "type": "BertPreTokenizer"
+  },
+  "post_processor": {
+    "type": "TemplateProcessing",
+    "single": [
+      {
+        "SpecialToken": {
+          "id": "[CLS]",
+          "type_id": 0
+        }
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+      {
+        "Sequence": {
+          "id": "A",
+          "type_id": 0
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+      {
+        "SpecialToken": {
+          "id": "[SEP]",
+          "type_id": 0
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+    "pair": [
+      {
+        "SpecialToken": {
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+      {
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+          "id": "A",
+          "type_id": 0
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+      {
+        "SpecialToken": {
+          "id": "[SEP]",
+          "type_id": 0
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+      {
+        "Sequence": {
+          "id": "B",
+          "type_id": 1
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+      },
+      {
+        "SpecialToken": {
+          "id": "[SEP]",
+          "type_id": 1
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+    "special_tokens": {
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+        "tokens": [
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+  "decoder": {
+    "type": "WordPiece",
+    "prefix": "##",
+    "cleanup": true
+  },
+  "model": {
+    "type": "WordPiece",
+    "unk_token": "[UNK]",
+    "continuing_subword_prefix": "##",
+    "max_input_chars_per_word": 100,
+    "vocab": {
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+      "X": 25,
+      "U": 26,
+      "B": 27,
+      "Z": 28,
+      "O": 29
+    }
+  }
+}

tokenizer_config.json

@@ -0,0 +1,58 @@
+{
+  "added_tokens_decoder": {
+    "0": {
+      "content": "[PAD]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
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+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
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+  },
+  "clean_up_tokenization_spaces": true,
+  "cls_token": "[CLS]",
+  "do_basic_tokenize": true,
+  "do_lower_case": false,
+  "full_tokenizer_file": null,
+  "mask_token": "[MASK]",
+  "model_max_length": 1000000000000000019884624838656,
+  "never_split": null,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "BertTokenizer",
+  "unk_token": "[UNK]"
+}

training_args.bin

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+version https://git-lfs.github.com/spec/v1
+oid sha256:a4a927ec68086a5347d42a0ab958648ca46e4865f34ce7a958e88ec1188d0029
+size 5112

vocab.txt

@@ -0,0 +1,30 @@
+[PAD]
+[UNK]
+[CLS]
+[SEP]
+[MASK]
+L
+A
+G
+V
+E
+S
+I
+K
+R
+D
+T
+P
+N
+Q
+F
+Y
+M
+H
+C
+W
+X
+U
+B
+Z
+O