Training in progress epoch 0

README.md

@@ -0,0 +1,57 @@
+---
+base_model: dmis-lab/biobert-v1.1
+tags:
+- generated_from_keras_callback
+model-index:
+- name: Meli101/biobert-v1.1-sentence-classifier-tf
+  results: []
+---
+
+<!-- This model card has been generated automatically according to the information Keras had access to. You should
+probably proofread and complete it, then remove this comment. -->
+
+# Meli101/biobert-v1.1-sentence-classifier-tf
+
+This model is a fine-tuned version of [dmis-lab/biobert-v1.1](https://huggingface.co/dmis-lab/biobert-v1.1) on an unknown dataset.
+It achieves the following results on the evaluation set:
+- Train Loss: 0.5898
+- Validation Loss: 0.3387
+- Train Precision: 0.8804
+- Train Recall: 0.8786
+- Train Accuracy: 0.8788
+- Train F1: 0.8788
+- Epoch: 0
+
+## Model description
+
+More information needed
+
+## Intended uses & limitations
+
+More information needed
+
+## Training and evaluation data
+
+More information needed
+
+## Training procedure
+
+### Training hyperparameters
+
+The following hyperparameters were used during training:
+- optimizer: {'name': 'Adam', 'weight_decay': None, 'clipnorm': None, 'global_clipnorm': None, 'clipvalue': None, 'use_ema': False, 'ema_momentum': 0.99, 'ema_overwrite_frequency': None, 'jit_compile': True, 'is_legacy_optimizer': False, 'learning_rate': {'module': 'keras.optimizers.schedules', 'class_name': 'PolynomialDecay', 'config': {'initial_learning_rate': 2e-05, 'decay_steps': 1535, 'end_learning_rate': 0.0, 'power': 1.0, 'cycle': False, 'name': None}, 'registered_name': None}, 'beta_1': 0.9, 'beta_2': 0.999, 'epsilon': 1e-08, 'amsgrad': False}
+- training_precision: float32
+
+### Training results
+
+| Train Loss | Validation Loss | Train Precision | Train Recall | Train Accuracy | Train F1 | Epoch |
+|:----------:|:---------------:|:---------------:|:------------:|:--------------:|:--------:|:-----:|
+| 0.5898     | 0.3387          | 0.8804          | 0.8786       | 0.8788         | 0.8788   | 0     |
+
+
+### Framework versions
+
+- Transformers 4.37.2
+- TensorFlow 2.15.0
+- Datasets 2.17.1
+- Tokenizers 0.15.2

config.json

@@ -0,0 +1,35 @@
+{
+  "_name_or_path": "dmis-lab/biobert-v1.1",
+  "architectures": [
+    "BertForSequenceClassification"
+  ],
+  "attention_probs_dropout_prob": 0.1,
+  "classifier_dropout": null,
+  "gradient_checkpointing": false,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.1,
+  "hidden_size": 768,
+  "id2label": {
+    "0": "marker/mechanism",
+    "1": "therapeutic",
+    "2": "unrelated"
+  },
+  "initializer_range": 0.02,
+  "intermediate_size": 3072,
+  "label2id": {
+    "marker/mechanism": 0,
+    "therapeutic": 1,
+    "unrelated": 2
+  },
+  "layer_norm_eps": 1e-12,
+  "max_position_embeddings": 512,
+  "model_type": "bert",
+  "num_attention_heads": 12,
+  "num_hidden_layers": 12,
+  "pad_token_id": 0,
+  "position_embedding_type": "absolute",
+  "transformers_version": "4.37.2",
+  "type_vocab_size": 2,
+  "use_cache": true,
+  "vocab_size": 28996
+}

special_tokens_map.json

@@ -0,0 +1,7 @@
+{
+  "cls_token": "[CLS]",
+  "mask_token": "[MASK]",
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "unk_token": "[UNK]"
+}

tf_model.h5

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:0f3b4dc616c3382d5b891db84811893eebc20d96503028e66e7ec412be98ce5e
+size 433538332

tokenizer_config.json

@@ -0,0 +1,57 @@
+{
+  "added_tokens_decoder": {
+    "0": {
+      "content": "[PAD]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "100": {
+      "content": "[UNK]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "101": {
+      "content": "[CLS]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "102": {
+      "content": "[SEP]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "103": {
+      "content": "[MASK]",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    }
+  },
+  "clean_up_tokenization_spaces": true,
+  "cls_token": "[CLS]",
+  "do_basic_tokenize": true,
+  "do_lower_case": false,
+  "mask_token": "[MASK]",
+  "model_max_length": 512,
+  "never_split": null,
+  "pad_token": "[PAD]",
+  "sep_token": "[SEP]",
+  "strip_accents": null,
+  "tokenize_chinese_chars": true,
+  "tokenizer_class": "BertTokenizer",
+  "unk_token": "[UNK]"
+}