janrodriguez
commited on
Commit
•
6041046
1
Parent(s):
1d4f287
Update README.md
Browse files
README.md
CHANGED
@@ -1,6 +1,6 @@
|
|
1 |
---
|
2 |
-
language:
|
3 |
-
|
4 |
tags:
|
5 |
- biomedical
|
6 |
- clinical
|
@@ -8,6 +8,7 @@ tags:
|
|
8 |
- spanish
|
9 |
- occupations
|
10 |
- professions
|
|
|
11 |
license: apache-2.0
|
12 |
metrics:
|
13 |
- precision
|
@@ -15,7 +16,6 @@ metrics:
|
|
15 |
- f1
|
16 |
base_model:
|
17 |
- PlanTL-GOB-ES/bsc-bio-ehr-es
|
18 |
-
|
19 |
model-index:
|
20 |
- name: BSC-NLP4BIA/prof-ner-es
|
21 |
results:
|
@@ -25,24 +25,31 @@ model-index:
|
|
25 |
name: MEDDOPROF
|
26 |
type: MEDDOPROF
|
27 |
metrics:
|
28 |
-
|
29 |
-
|
30 |
-
|
31 |
-
|
32 |
-
|
33 |
-
|
34 |
-
|
35 |
-
|
36 |
-
|
37 |
widget:
|
38 |
-
- text:
|
39 |
-
|
40 |
-
|
41 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
42 |
---
|
43 |
|
44 |
|
45 |
-
#
|
46 |
|
47 |
## Table of contents
|
48 |
<details>
|
@@ -64,7 +71,7 @@ widget:
|
|
64 |
</details>
|
65 |
|
66 |
## Model description
|
67 |
-
A fine-tuned version of the [bsc-bio-ehr-es](https://huggingface.co/PlanTL-GOB-ES/bsc-bio-ehr-es) model on the [MEDDOPROF](https://zenodo.org/records/7116201) corpus (original Spanish version).
|
68 |
|
69 |
For further information, check the [official website](https://temu.bsc.es/meddoprof/).
|
70 |
|
@@ -81,7 +88,9 @@ At the time of submission, no measures have been taken to estimate the bias embe
|
|
81 |
The model was trained using the Barcelona Supercomputing Center infrastructure.
|
82 |
|
83 |
## Evaluation
|
84 |
-
F1 Score: 0.780 on MEDDOPROF (Spanish)
|
|
|
|
|
85 |
|
86 |
## Additional information
|
87 |
|
|
|
1 |
---
|
2 |
+
language:
|
3 |
+
- es
|
4 |
tags:
|
5 |
- biomedical
|
6 |
- clinical
|
|
|
8 |
- spanish
|
9 |
- occupations
|
10 |
- professions
|
11 |
+
- employment
|
12 |
license: apache-2.0
|
13 |
metrics:
|
14 |
- precision
|
|
|
16 |
- f1
|
17 |
base_model:
|
18 |
- PlanTL-GOB-ES/bsc-bio-ehr-es
|
|
|
19 |
model-index:
|
20 |
- name: BSC-NLP4BIA/prof-ner-es
|
21 |
results:
|
|
|
25 |
name: MEDDOPROF
|
26 |
type: MEDDOPROF
|
27 |
metrics:
|
28 |
+
- name: precision (micro)
|
29 |
+
type: precision
|
30 |
+
value: 0.785
|
31 |
+
- name: recall (micro)
|
32 |
+
type: recall
|
33 |
+
value: 0.776
|
34 |
+
- name: f1 (micro)
|
35 |
+
type: f1
|
36 |
+
value: 0.78
|
37 |
widget:
|
38 |
+
- text: >-
|
39 |
+
El diagnóstico definitivo de nuestro paciente fue de un Adenocarcinoma de
|
40 |
+
pulmón cT2a cN3 cM1a Estadio IV (por una única lesión pulmonar
|
41 |
+
contralateral) PD-L1 90%, EGFR negativo, ALK negativo y ROS-1 negativo.
|
42 |
+
- text: >-
|
43 |
+
Durante el ingreso se realiza una TC, observándose un nódulo pulmonar en el
|
44 |
+
LII y una masa renal derecha indeterminada. Se realiza punción biopsia del
|
45 |
+
nódulo pulmonar, con hallazgos altamente sospechosos de carcinoma.
|
46 |
+
- text: >-
|
47 |
+
Trombosis paraneoplásica con sospecha de hepatocarcinoma por imagen, sobre
|
48 |
+
hígado cirrótico, en paciente con índice Child-Pugh B.
|
49 |
---
|
50 |
|
51 |
|
52 |
+
# PROF-NER-ES
|
53 |
|
54 |
## Table of contents
|
55 |
<details>
|
|
|
71 |
</details>
|
72 |
|
73 |
## Model description
|
74 |
+
A fine-tuned version of the [bsc-bio-ehr-es](https://huggingface.co/PlanTL-GOB-ES/bsc-bio-ehr-es) model on the [MEDDOPROF](https://zenodo.org/records/7116201) corpus (original Spanish version) for professions/jobs (PROFESION) and employment status (SITUACION_LABORAL).
|
75 |
|
76 |
For further information, check the [official website](https://temu.bsc.es/meddoprof/).
|
77 |
|
|
|
88 |
The model was trained using the Barcelona Supercomputing Center infrastructure.
|
89 |
|
90 |
## Evaluation
|
91 |
+
Micro F1 Score: 0.780 on MEDDOPROF (Spanish)
|
92 |
+
PROFESION F1 Score: 0.853
|
93 |
+
SITUACION_LABORAL F1 Score: 0.645
|
94 |
|
95 |
## Additional information
|
96 |
|